Fulvivirga ligni: LVD16_16425
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Entry
LVD16_16425 CDS
T09288
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
flw
Fulvivirga ligni
Pathway
flw01501
beta-Lactam resistance
flw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVD16_16425
01503 Cationic antimicrobial peptide (CAMP) resistance
LVD16_16425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flw03036
]
LVD16_16425
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_16425
01504 Antimicrobial resistance genes [BR:
flw01504
]
LVD16_16425
Chromosome and associated proteins [BR:
flw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LVD16_16425
Transporters [BR:
flw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LVD16_16425
Antimicrobial resistance genes [BR:
flw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LVD16_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_CzcB
CzcB_C
BSH_RND
Beta-barrel_RND
BSH_CusB
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
UII19426
LinkDB
All DBs
Position
3857140..3858216
Genome browser
AA seq
358 aa
AA seq
DB search
MQPITYMQNSKKWIFFLLIISGFWSCNNEKSNIQTDIKIPVSVQSIKPQSISRFIETTGT
VYSSKEAIMKSELAGIYKIQTNPDTGKPYALGDAVKAGQIIIKIEDKEFENNLQLEGKRL
NLELTESNLQKQKSLYDKGGVTQTELKNSNIEYVNSKYSYENAEIQMAKMYVRAPFSGVV
VEMPYHTIGVRIDQGQDLFKVMEYEHLLMDVKLPEKHQSEVNVNQQVQITNYNVAKDTIY
GKIDQISPVIDADTRTFQSVLQIDNGKSLLRPGMFIKAAILAEKRDSTIVIPKETIISRQ
DGKIVFTVENGIASEKRITTGLENMDVIEVTSGLKVNDRLVTSGFETLRDKSKVSVVQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaataacatacatgcaaaactcaaaaaaatggattttctttcttttgattatc
agtggcttctggtcctgtaataatgagaaatctaatatccagacagatattaaaattccg
gtgtcagtacagagtatcaagcctcagagcatttctcgtttcattgaaaccacaggtacg
gtgtactcttctaaggaggccatcatgaaatctgagctggcgggtatttacaagatccag
actaatcctgacacgggtaaaccctatgctctgggtgatgctgtgaaagcgggtcagatc
atcattaaaatagaagataaagagtttgaaaataacctgcagctggaaggtaaaaggctt
aatcttgagctcaccgagagtaatcttcaaaaacaaaagtctttatatgacaaaggcggt
gtaacgcagacggagctaaagaactctaatattgagtatgtaaattctaaatactcttat
gagaatgctgagattcagatggctaaaatgtacgttagagcgccattttccggagttgtt
gtagaaatgccttaccacaccattggcgtgagaatagatcagggtcaggatctgttcaag
gtgatggaatacgaacatcttctcatggatgtaaaactgccggaaaagcatcagtctgag
gtgaatgtaaaccagcaggtacaaatcactaactacaatgtagccaaagataccatttac
ggtaaaatagatcagatatcacctgtaattgacgcagataccaggaccttccaaagcgtg
ctgcagatcgataacggcaaaagtcttctacgtccgggcatgttcatcaaagcggccatt
cttgccgagaagcgagacagcaccattgtgataccaaaagagactatcatcagcagacag
gatggtaaaattgtgttcaccgtggaaaatggtattgccagtgagaagcgcatcaccaca
ggtctggaaaatatggatgtgatcgaggtcacgtcaggactaaaagttaatgacaggctt
gttaccagtggttttgaaacgctgagagataagtccaaagtcagtgtagttcaataa
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