Flavobacterium sp. YJ01: P0R33_08820
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Entry
P0R33_08820 CDS
T11516
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fly Flavobacterium sp. YJ01
Pathway
fly00300
Lysine biosynthesis
fly00550
Peptidoglycan biosynthesis
fly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P0R33_08820
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P0R33_08820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fly01011
]
P0R33_08820
Enzymes [BR:
fly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
P0R33_08820
Peptidoglycan biosynthesis and degradation proteins [BR:
fly01011
]
Precursor biosynthesis
Amino acid ligase
P0R33_08820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
DUF3440
Motif
Other DBs
NCBI-ProteinID:
WET04424
LinkDB
All DBs
Position
complement(2012896..2014359)
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AA seq
487 aa
AA seq
DB search
MKVLKDILYKVAIESVKGSTDIAIHKIEFDSRKVESNDVFVAIRGSLSDGHDYIEKAIQL
GAKAIICDTLHENTIAEVTYIQVKDTNAALAFMAANYFEDPSAKLKLVGVTGTNGKTTIA
SLLFQLFEKAGFKVGLLSTVKIVVDKTEYPATHTTPDSLTINHYLNEMVEAGVTHCFMEV
SSHGIHQKRTEALHFVGGIFTNLSHDHLDYHPTFAEYRDVKKSFFDSLPKSAFVLSNIDD
KNGSVMLQNTVAKKLTYALKSYADYRAQILESQLSGLLLKVNDNEVWVKLIGTFNAYNVL
AIYGTAVELGIDSLEALRLLSDLESVSGRFQYIVSDGGITAVVDYAHTPDALENVLKTIN
DIRTKNEQLITVVGCGGNRDKTKRPIMAKIASDLSDKAVLTSDNPRNEDPEVILDEMEQG
VEPQNYKKMLRITDRKQAIKTACQLAQPKDIILIAGKGHETYQEINGVRHHFDDMETIKE
ILEQLNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtattaaaagacatattatataaagtagctatcgaatctgtaaaaggttcgaca
gatattgctattcataaaattgaattcgattcacgtaaagtagaatcaaatgatgttttt
gtagctattcgtggttcactttcagatggacatgattacattgaaaaagcgattcagctt
ggagcaaaagcaattatttgtgatacgcttcatgaaaatactattgctgaagtaacttat
attcaagttaaagacaccaatgcggctttggcttttatggcagctaattattttgaagat
ccgtctgcgaaattaaaattagttggtgtaacaggaacaaatggtaaaacaacaattgcg
tcattattgtttcaattgttcgaaaaagcaggttttaaagttggtttattatcaacagta
aaaattgtagtagataaaacagaatacccagcaacgcatacaacaccagattctttgaca
atcaatcattatttaaatgaaatggtcgaagctggagttacacattgttttatggaagtt
agttcgcatggaattcaccaaaaacgtacagaagcattgcattttgtaggcggaattttt
acgaatctttctcacgatcatttagattatcatccaacatttgctgaatatagagatgtt
aaaaagtcattttttgactcgcttcctaaatcagcttttgtgttatcaaatattgatgat
aaaaatggttctgtgatgcttcagaatacggtggctaaaaaattgacttacgctttaaaa
tcgtatgcagattatagagctcagattttagaaagccaattatctggattattactgaaa
gttaatgataatgaagtttgggtaaaactgattggtactttcaacgcatacaatgtttta
gctatttacggaacggctgtagagctcggaattgatagtcttgaagcgttgcgtttattg
tctgatttagaaagcgtttcgggacgttttcagtatatcgtatcagatggcggaattacc
gctgtcgtagattacgcccatacgccagatgcccttgaaaatgttttgaaaacaatcaat
gacattcgaacaaaaaatgaacagttaattactgttgttggatgcggaggaaacagagat
aaaacaaaacgtccgataatggcaaaaatcgcttcagatttaagtgataaagcagtgttg
acctctgataatccgagaaatgaagatccagaagttattttggatgaaatggagcaggga
gttgagcctcagaattacaaaaaaatgctgagaattacagatagaaaacaagctataaaa
accgcttgtcaattggctcagccaaaagatattattctaattgcaggaaaaggacatgaa
acatatcaagaaataaatggtgttcgccatcattttgatgatatggaaaccataaaagag
attttagaacaactaaataaataa
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