Flavobacterium sp. YJ01: P0R33_13195
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Entry
P0R33_13195 CDS
T11516
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fly Flavobacterium sp. YJ01
Pathway
fly01501
beta-Lactam resistance
fly01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
P0R33_13195
01503 Cationic antimicrobial peptide (CAMP) resistance
P0R33_13195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fly03036
]
P0R33_13195
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fly02000
]
P0R33_13195
01504 Antimicrobial resistance genes [BR:
fly01504
]
P0R33_13195
Chromosome and associated proteins [BR:
fly03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
P0R33_13195
Transporters [BR:
fly02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
P0R33_13195
Antimicrobial resistance genes [BR:
fly01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
P0R33_13195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
BSH_CusB
HH_EMRA
Beta-barrel_RND_2
BSH_YknX
HH_YBHG
YknX_C
Biotin_lipoyl
CzcB_C
HH_AprE
BSH_LcnD
PilZN
Motif
Other DBs
NCBI-ProteinID:
WET00725
LinkDB
All DBs
Position
complement(3014039..3015193)
Genome browser
AA seq
384 aa
AA seq
DB search
MNALKLPKPILPLFFLLTLTTSCKKEQPKAPPPMQAPFVTVKSEDVPIYKDFAGQTFGDL
DIELIARVDGILTGIHFKEGQRVKKGQLLYTIDPLEYDTKVEQVRGQVAGAQSNLVNAEE
ELKRIRPLADMNAVSKRELDAAVAKDKAARSNLNSVQASLRNQQIERSYCDIKSPIDGVI
GLSNARLGDYITRIGNDSKLNTVSKLEKVRVQFTVSEADYLRYQKQVKAGERITDLALIL
SDGSTHSEKGSLNFSDTKIDPTTGTVTIEAQFPNPDGTLRSGQFAKVRVLLRTQKDAIVV
PQKAVTEIQGLFQVSIIDDKNTIQTRMVEVGQKIGVDWIITKGLKPDEKVAIIGNQFIQP
GSTVVPVPYVADKDKKQIASSLNN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttaaaactaccaaaaccaatccttcccctcttcttccttttaaccttaact
acttcatgcaaaaaagagcaacccaaggctccgcctcctatgcaggctccatttgtcacg
gtcaaaagtgaagacgtccccatttataaagattttgcgggacagacttttggagattta
gacattgaattaatcgcaagagttgatggcatcttgaccggaattcattttaaagaaggt
caaagggtgaaaaaaggccagcttttatataccatcgatccgttagaatatgataccaaa
gtagaacaagttcgcggtcaagttgcaggcgctcaaagtaatttggtaaatgccgaagaa
gaactaaaaagaatccgcccgcttgcagatatgaacgccgttagtaaacgtgaattagat
gccgctgtcgcgaaagacaaagcggcacgctccaacttaaacagcgttcaggccagttta
agaaatcagcagattgaacgaagctattgcgatattaaatctccgattgatggcgttatc
ggactctcgaatgccagattgggcgattatattacccgaattggaaatgattctaaacta
aatacggtttccaaactagaaaaagttagagttcagtttaccgtaagtgaagctgattat
cttcgttatcaaaaacaagtaaaagctggagaacgtattaccgatcttgccttaattctt
tctgacggaagtacccattcggaaaaaggaagtctcaatttttctgacactaaaattgat
cccacaacaggaacagttactattgaagcgcagtttcctaacccagacggtacgttacga
tctggtcaattcgcaaaagtccgtgttttattaagaacacaaaaagatgctatcgtagtt
ccgcagaaagcggtaactgaaattcagggactttttcaggtttctataattgacgataaa
aataccattcaaacccgaatggtcgaagtcggacaaaaaattggtgtcgactggattatc
acaaaaggcttaaaacccgacgagaaagtcgccataattggcaatcagtttattcagcct
ggatcaaccgttgttccagttccttatgttgccgacaaagataaaaagcagattgcatca
tctctaaacaactag
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