Flavobacterium sp. SLB02: GIY83_04335
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Entry
GIY83_04335 CDS
T10548
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
flz Flavobacterium sp. SLB02
Pathway
flz01501
beta-Lactam resistance
flz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GIY83_04335
01503 Cationic antimicrobial peptide (CAMP) resistance
GIY83_04335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flz03036
]
GIY83_04335
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flz02000
]
GIY83_04335
01504 Antimicrobial resistance genes [BR:
flz01504
]
GIY83_04335
Chromosome and associated proteins [BR:
flz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GIY83_04335
Transporters [BR:
flz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GIY83_04335
Antimicrobial resistance genes [BR:
flz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GIY83_04335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
YknX_C
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
BSH_YknX
HH_EMRA
Mfa_like_1
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QGK73313
LinkDB
All DBs
Position
complement(1060761..1061984)
Genome browser
AA seq
407 aa
AA seq
DB search
MNAQNIRISQNLNNKNVQQIKTNTKMKNVIITSFILALVLSSCADKSQAPAAPAPPLLPV
LAITSENTTTDAEYPASIQGTVDVEIRPQVSGNLERVYVDEGAYVSKGQTLFKINERPFR
EQLNNALASLHAYEAALINANLEVDKLTPLVQNKVVSDYQLKTAKASQKIAAANIEQARA
MVGSAKINLGYTNVTAPVSGYIGRLPKKQGSLVSATDLEPLTNLSDVHEVYAYFSLGETD
FINFKAQYAGNSLGDKLKKLPPVTLVLADNNAYPQTGKIDMVDGQFDKTTGAITLRATFP
NTGGTLRSGNTGKIRLGLQHDDAVLVPQSATVEMQDKVFVFTVNKENKVTKMPITVSGKS
GTNYLIKDGVKSGDQIVLSGIDKLQDGQVIQPEKSSPAKVAQIINKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccagaatatcagaatatcacaaaatttaaacaataagaatgtccaacaaatt
aaaaccaatacaaaaatgaaaaatgtaattataaccagctttattctggcactcgtgcta
agcagttgtgcagataagtcgcaggctccggcagctcctgctccaccattattaccagtt
ttagccatcacaagcgagaacactactactgatgctgaatatcctgcttcgatacaagga
acagttgatgttgaaattcgcccacaagttagcggaaaccttgaaagagtgtatgtagac
gaaggtgcttatgtaagtaaaggtcagactttattcaaaataaacgaacgtccttttcgc
gagcaattaaacaatgctttagcaagtcttcatgcttacgaagctgctttaattaacgct
aacttagaagtggataaattgactcctttggtacaaaacaaagtagtttcagactatcag
ttaaaaacggctaaggcttctcaaaaaattgctgctgccaacatcgaacaagcaagagca
atggtaggttctgctaaaattaacttaggatataccaatgttacagctccagtgagtggc
tacattggaagattgcctaaaaaacagggaagtttagtttctgcaactgatcttgagcca
ttaacaaacttatctgatgttcatgaagtttacgcttatttctctttaggagaaactgat
tttatcaactttaaagcgcaatacgctggaaacagccttggtgataaactaaaaaaatta
cctcctgttactttggttttggccgataacaatgcttatcctcaaaccggaaaaattgat
atggtcgacggtcagtttgataaaactaccggagcaattaccctaagggctactttcccg
aatactggcggaactctacgttcaggaaacacggggaaaattcgtttaggtcttcaacat
gacgatgctgttttggttcctcaatcggctactgtagaaatgcaggataaagtttttgtt
ttcacagtaaacaaagaaaacaaagttaccaaaatgcctatcacggtttctggtaaaagc
ggaacaaactatttaattaaagatggtgtaaaatctggtgaccaaattgtattgagcggt
attgataaactacaggacggacaagtgattcagcctgagaaatcatcgcctgcaaaagtt
gcccaaataattaataaaaaataa
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