Flavobacterium sp. SLB02: GIY83_09925
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Entry
GIY83_09925 CDS
T10548
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
flz Flavobacterium sp. SLB02
Pathway
flz01501
beta-Lactam resistance
flz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GIY83_09925
01503 Cationic antimicrobial peptide (CAMP) resistance
GIY83_09925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flz03036
]
GIY83_09925
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flz02000
]
GIY83_09925
01504 Antimicrobial resistance genes [BR:
flz01504
]
GIY83_09925
Chromosome and associated proteins [BR:
flz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GIY83_09925
Transporters [BR:
flz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GIY83_09925
Antimicrobial resistance genes [BR:
flz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GIY83_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
YknX_C
BSH_CusB
Biotin_lipoyl
RND-MFP_C
HH_MFP_RND
BSH_YknX
BSH_CzcB
KIF9
HH_CzcB
CzcB_C
BSH_YhbJ
NQRA_N
LSM14
Beta-barrel_RND_2
Motif
Other DBs
NCBI-ProteinID:
QGK74361
LinkDB
All DBs
Position
complement(2614183..2615316)
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AA seq
377 aa
AA seq
DB search
MTKQFFQNNKTLSKMVVLLIIISFSSCGKSGPEGVAPPKPEVDFFQAKSITGEVEKKYPG
IIEGTVNVDIKAQVSGYLEAIYVKEGDYVTKGQSLFKIKADVYAEQVNNSRAAYKNALAN
LANAKLEIEKIKPLVEAKVYSDMQLKTAQANYDAASAQAAQAKAALGSSQLNADFSLIKA
PVSGYISRIPNRIGNLVTPSDVVPLTILSEINTVFVYFSLSEADYLEFSKDAKSNQTVSL
ILADDSLYEHQGKLEVASGNIDRTTGSIALKAVFSNPKKQLRSGGSARVVLNSNLASVIT
VPMASVKDIQDKFFVYVLKEGNKVAMVPIEIAGSAGTDYFVKSGVKSGDKIALNSIDLLY
DGVEVVPKTAAKPQTNK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaattttttcaaaataataaaacactcagcaaaatggtagttttattgatt
atcattagcttttcttcatgcggtaaaagtggaccggaaggcgtagcgccgccaaaacct
gaagtagatttttttcaggctaaatcgatcacaggcgaagtagaaaaaaaatatccgggt
attattgaaggtactgtaaatgttgacataaaagcgcaggtttcaggttatcttgaagcg
atttatgttaaagaaggcgattatgttaccaaaggccagtcactgtttaaaatcaaagca
gatgtttatgcagagcaggtaaataatagccgtgcagcttacaaaaatgctttggctaac
cttgccaatgccaaattagaaatcgaaaagatcaaaccacttgttgaggcaaaagtatat
tcagacatgcagttaaaaacagcgcaggccaattacgatgcagcatcagctcaggcagcg
caggcaaaagcagcattgggatcttcacagcttaacgccgatttttctttgataaaagca
ccggtaagtggttacatcagcagaattcctaatagaataggaaatctggttactccttca
gatgtggtcccgcttacgattctttctgagatcaataccgtttttgtttatttctcttta
agcgaagcagattatcttgaattttctaaagatgcaaaatcaaaccaaaccgttagttta
atcctggcggatgacagcctatacgagcatcagggaaaactggaagtagccagtggtaat
atcgaccgtaccacaggaagtattgctttaaaagccgttttctcgaatcctaaaaagcaa
ttgcgttcaggaggttctgcccgtgtagtgctgaatagcaatttagcttcggtaattaca
gttccaatggcgagtgtaaaggatattcaggataaattctttgtttatgttctaaaagaa
ggtaacaaagtggcgatggttcctatagaaattgccggcagtgcaggtacagattatttt
gtaaaaagtggcgtaaaatcaggtgataagattgcattaaacagtatcgatttgctttat
gatggtgtcgaagtagtgccaaaaactgcggcgaaaccgcaaaccaacaaataa
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