Flavobacterium sp. SLB02: GIY83_18660
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Entry
GIY83_18660 CDS
T10548
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
flz Flavobacterium sp. SLB02
Pathway
flz01501
beta-Lactam resistance
flz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GIY83_18660
01503 Cationic antimicrobial peptide (CAMP) resistance
GIY83_18660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flz03036
]
GIY83_18660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flz02000
]
GIY83_18660
01504 Antimicrobial resistance genes [BR:
flz01504
]
GIY83_18660
Chromosome and associated proteins [BR:
flz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GIY83_18660
Transporters [BR:
flz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GIY83_18660
Antimicrobial resistance genes [BR:
flz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GIY83_18660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
Beta-barrel_YknX
RND-MFP_C
HH_MFP_RND
HH_EMRA
BSH_CzcB
CzcB_C
BSH_RND
HH_YBHG
Biotin_lipoyl
BSH_CusB
LcnD_C
BSH_YknX
Beta-barrel_RND_rel
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QGK76014
LinkDB
All DBs
Position
complement(4977878..4978945)
Genome browser
AA seq
355 aa
AA seq
DB search
MKKTILTIVIIIAALGVIGYVLNNNKKENKEKTDIVAEKNAAVSVKVAPVKTEEVSLDFV
ANGNFQPIQQLTFSAEKSGKVISVLAKEGDYVRVGQTLLTMRGDVINVSAQQAQAVYQNA
KSDYSRYENAFKTGGVTKQQLDQAKLALTNAESNLKQANINVGDTKVKAPINGFINKKYI
EPGSILTGMPATALFDIVNVSKLKLVVTVNENQVASLKVGNQINVTASVYPDKTFSGKIT
FIAAKADESLNFPVEIEITNNINNDLKAGMYGTANFASNQQKQHLMVVPRNAFVGSVSSN
EIFVVEKGIARLRKVTAGRILGDQVEIIKGLSDGETVIVTGQINLQDGNTVEIIK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaactattttaacaatcgtaatcataatcgcagcgctgggtgtgattggatat
gtcttaaataataataagaaagagaataaagaaaaaacagatatcgtagcagaaaaaaat
gctgcagtttcagtaaaagtagctcctgtaaaaacagaagaagtttcattagactttgtg
gctaacggaaattttcaacccattcagcaattgactttctctgcggaaaaatcaggaaaa
gtaattagcgttttggctaaagaaggagattatgtaagagtaggtcaaactttattgaca
atgagaggtgatgtaattaatgtaagtgcgcaacaagctcaggctgtttaccaaaatgca
aaatccgattacagccgttacgaaaatgcttttaaaacaggtggtgttacaaaacaacaa
ttagatcaggcaaaattagctttaacaaatgctgagtctaacttaaaacaagctaacatt
aatgttggagatactaaagtaaaagctccaataaacggattcatcaacaaaaaatacatt
gagccgggatctatcttaacaggaatgcctgcaactgctttgtttgatattgtaaatgtt
tctaaattaaaattagtagttacagtaaacgaaaatcaggttgcaagcttaaaagttgga
aaccaaattaatgtaacagcaagtgtttatcctgacaaaactttctctggaaaaatcact
tttattgctgcaaaagcagatgagtctttaaattttccggttgaaatcgaaattacaaat
aacataaacaacgaccttaaagcaggtatgtacggaactgcaaactttgcatcaaaccag
caaaaacaacaccttatggttgtaccaagaaatgctttcgtaggaagtgtgagcagcaac
gagatttttgtagttgaaaaaggtattgcaagattaagaaaagtaactgcaggaagaatt
ttaggagatcaggtggaaattatcaaaggattatctgacggagaaactgtaattgttaca
ggtcaaattaacttacaagacggtaatactgtagaaattattaaataa
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