KEGG   Fomitiporia mediterranea: FOMMEDRAFT_126450
Entry
FOMMEDRAFT_126450 CDS       T03132                                 
Name
(RefSeq) ring-box Roc1/Rbx1/Hrt1 protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
fme  Fomitiporia mediterranea
Pathway
fme03420  Nucleotide excision repair
fme04111  Cell cycle - yeast
fme04120  Ubiquitin mediated proteolysis
fme04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    FOMMEDRAFT_126450
   04120 Ubiquitin mediated proteolysis
    FOMMEDRAFT_126450
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOMMEDRAFT_126450
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    FOMMEDRAFT_126450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_126450
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_126450
Enzymes [BR:fme01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     FOMMEDRAFT_126450
Ubiquitin system [BR:fme04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   FOMMEDRAFT_126450
  Multi subunit type E3
   SCF complex
    Ring finger protein
     FOMMEDRAFT_126450
   Cul2 complex
     FOMMEDRAFT_126450
   Cul3 complex
     FOMMEDRAFT_126450
   Cul4 complex
     FOMMEDRAFT_126450
   Cul7 complex
     FOMMEDRAFT_126450
   Cul8 complex
     FOMMEDRAFT_126450
   Cul9 complex
     FOMMEDRAFT_126450
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      FOMMEDRAFT_126450
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      FOMMEDRAFT_126450
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 18671417
NCBI-ProteinID: XP_007268761
JGI: Fomme1_126450
LinkDB
Position
Unknown
AA seq 118 aa
MADMEVDTPVETAPAPSTASKKKADGKDKKRFEVKKWNAVALWSWDIVVDNCAICRNHIM
DLCIDCQANQVSATSEECNAAWGICNHAFHFHCIARWLKTRNVCPLDNREWELQKYGR
NT seq 357 nt   +upstreamnt  +downstreamnt
atggccgacatggaagttgacactcctgttgagaccgcacccgccccatcgacagcatcg
aaaaagaaagctgatggaaaggacaagaagcgtttcgaggttaagaagtggaatgccgtg
gcgctctggtcgtgggacatcgtcgtcgacaactgtgccatctgtagaaaccatattatg
gacctctgcatcgattgtcaagcaaatcaggtatctgcaacatcagaggaatgtaatgcg
gcatggggtatttgcaaccacgcattccacttccattgcattgcgcgatggctaaagact
cggaatgtctgtccgttggataatagggaatgggagttgcagaagtatggtcggtag

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