Fomitiporia mediterranea: FOMMEDRAFT_134372
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Entry
FOMMEDRAFT_134372 CDS
T03132
Name
(RefSeq) DNA/RNA polymerase
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
FOMMEDRAFT_134372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_134372
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOMMEDRAFT_134372
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
FOMMEDRAFT_134372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
mSLOG
Pterin_bind
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
18671918
NCBI-ProteinID:
XP_007267021
JGI:
Fomme1_134372
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MIEDSPVALEPSQDTASLVKRLAGPSVTKAGLAKDQTEINRIIAEVSKGSKFYENEKRKD
KELTERIAKILKIKDDVVKSANIQELEAERDLSQAIVHVDMDAFYASVELLLNPDLEGKP
FGVCLGVLSTASYEARKHGVRSGMAGFVAKKLCPELIVIPVNFEKYSEMSRKVMSIFKEY
DPTMIVAGCDEGYLNITKYCAQHGISPEDCVKEMRQKVHEETKLTASAGIASNKICSDKN
KPNGQFALPSERDAITAFMRDLSIRKLPGVGRVHERLLDSIGVKTCGDIYAHRAVIWLMD
HYFSKIFLYSAYLGIASNVVEPYQRDERKSIGAERTFTPISDHEKLLEKLEEVAEELEND
MRDNGWAGKTVTLKYKLNTYQVYTRAKSFNRWITRKEDLFNTGKELLKPELPLCLRLIGL
RVTKLKDLRARADQGIKRRRKLDSSADDQLHEFQRLVDEEEADAIKMSEFPDELDNALEA
DIHNESLKKPASSTSRDTYVDAGEDQRHNANLDPSTPERDLDENNTQQCPICAKLLDTRD
NAALNAHIDFCLSKDIIKQASASASHGKSPAISNGARKPRSKVGPRKGNRTLDNWDWKGR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacagtccagtggcgctagagccttctcaagacactgccagcctcgtcaag
cgtctagccggaccttctgtgacaaaagcaggccttgcaaaggaccagaccgagatcaac
cgaataattgcagaggtgtccaagggatcaaaattttacgaaaatgagaaacgcaaagac
aaggaacttaccgagagaattgccaagatcctcaagattaaggatgatgtggtgaaatcg
gccaacattcaagagctcgaggccgaaagagatctcagtcaggctatcgtccacgtagac
atggacgcattttacgctagtgttgagcttctgctcaatccggatctcgagggaaaaccg
ttcggggtatgcttgggtgttcttagcacagcgtcctacgaagcgcgaaagcatggagtg
cgctctgggatggcaggtttcgtcgccaagaaactctgtcccgaactcattgttattcca
gtaaacttcgagaagtattcggaaatgtcaagaaaagtcatgtccatcttcaaagaatat
gatccaaccatgatcgtcgctggctgcgacgagggctacctcaacatcacgaaatactgc
gcgcaacacggtatatctcctgaagactgtgtcaaagaaatgcgacaaaaggttcatgaa
gagacgaagctcactgccagtgctgggatagcttccaataagatttgctccgataagaac
aaacctaacggacaattcgccctcccatctgagcgcgacgcgatcactgcatttatgcgt
gacctttctattcgtaaattaccaggtgtaggtcgagttcacgaacgtctactcgattct
atcggcgtcaagacatgcggagatatatatgctcacagagctgtcatatggctaatggac
cactatttctcaaagatattcttgtatagtgcctaccttggtatagcctcgaacgttgtg
gaaccttaccagcgtgacgagcgaaagagcatcggagccgagagaaccttcactcctatc
agtgaccatgagaaactgttagagaagcttgaagaagtagccgaggagctcgagaatgat
atgcgagacaatggatgggcggggaagacagttacactgaagtacaaactcaatacatac
caagtttacacaagggcaaagtccttcaaccggtggatcacacggaaagaggatctgttc
aacacgggaaaagagctactaaaaccagagctacctttatgcctgcgactgatcggatta
cgagtaacaaagctgaaggatctccgagctcgagcagatcaagggataaaacggaggcga
aagctcgacagctctgcagatgatcagttacacgagtttcaacgactcgtagatgaggaa
gaggcagacgcaatcaagatgtcagagttcccggacgagcttgacaatgcattggaagcc
gacattcacaacgagtctcttaaaaagcctgcatcttctacgagtagagatacctacgtt
gatgctggagaagaccagagacacaacgcgaatttggatccgtcaaccccagaacgcgat
ttagacgaaaacaacacccaacaatgcccaatctgcgccaaattattagacacgcgggat
aacgccgcgttgaacgcgcatatcgacttttgtctaagtaaggatattatcaagcaggcg
tctgcttctgcatctcatggcaagtctcctgctatctcgaatggagctcgtaaaccacgg
tcaaaagtcgggccgcggaaaggtaatcggacactagataactgggactggaaaggaaga
tag
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integrated database retrieval system
