Fomitiporia mediterranea: FOMMEDRAFT_83902
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Entry
FOMMEDRAFT_83902 CDS
T03132
Name
(RefSeq) snRNP subunit
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_83902
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_83902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_83902
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_83902
Spliceosome [BR:
fme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FOMMEDRAFT_83902
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
FOMMEDRAFT_83902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
18680164
NCBI-ProteinID:
XP_007265598
JGI:
Fomme1_83902
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MADEQKSKAWPLADATLTNQILDLVQQASQYKQLKKGANEATKTLNRGIAEFIVLTADTE
PIEILLHLPLLCEDKNVPYVYVPSKAALGRACNVTRPVIAASVTTNESNELNSQIRTIKS
AIEKLMI
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagcaaaagagcaaagcatggccactggcagatgcaacgcttacgaaccag
attcttgacctcgttcaacaagcttctcagtacaagcagctcaagaaaggtgcaaatgaa
gctacgaagactttgaaccgtggtatcgccgagttcatcgtgttgactgcagacacagaa
cccatcgagattctattgcacttgccccttctatgtgaggacaagaatgtcccatatgtg
tatgtgccctcgaaggccgcgttgggccgtgcctgcaatgtaacgaggcctgttatcgcc
gcaagtgtaacgacaaacgaatcaaacgagttaaatagtcagattcgaactatcaagtct
gctatcgagaagctcatgatctaa
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