KEGG   Fomitiporia mediterranea: FOMMEDRAFT_83902
Entry
FOMMEDRAFT_83902  CDS       T03132                                 
Name
(RefSeq) snRNP subunit
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
fme  Fomitiporia mediterranea
Pathway
fme03008  Ribosome biogenesis in eukaryotes
fme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOMMEDRAFT_83902
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FOMMEDRAFT_83902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_83902
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_83902
Spliceosome [BR:fme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    FOMMEDRAFT_83902
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    FOMMEDRAFT_83902
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1
Other DBs
NCBI-GeneID: 18680164
NCBI-ProteinID: XP_007265598
JGI: Fomme1_83902
LinkDB
Position
Unknown
AA seq 127 aa
MADEQKSKAWPLADATLTNQILDLVQQASQYKQLKKGANEATKTLNRGIAEFIVLTADTE
PIEILLHLPLLCEDKNVPYVYVPSKAALGRACNVTRPVIAASVTTNESNELNSQIRTIKS
AIEKLMI
NT seq 384 nt   +upstreamnt  +downstreamnt
atggctgatgagcaaaagagcaaagcatggccactggcagatgcaacgcttacgaaccag
attcttgacctcgttcaacaagcttctcagtacaagcagctcaagaaaggtgcaaatgaa
gctacgaagactttgaaccgtggtatcgccgagttcatcgtgttgactgcagacacagaa
cccatcgagattctattgcacttgccccttctatgtgaggacaagaatgtcccatatgtg
tatgtgccctcgaaggccgcgttgggccgtgcctgcaatgtaacgaggcctgttatcgcc
gcaagtgtaacgacaaacgaatcaaacgagttaaatagtcagattcgaactatcaagtct
gctatcgagaagctcatgatctaa

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