Fomitiporia mediterranea: FOMMEDRAFT_90593
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Entry
FOMMEDRAFT_90593 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_90593
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
FOMMEDRAFT_90593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-Nse
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_4
zf-RING_6
DUF5857
Motif
Other DBs
NCBI-GeneID:
18680575
NCBI-ProteinID:
XP_007268121
JGI:
Fomme1_90593
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MKTTTRGKGQGKAAAVDTALFASLADVRAARRSAAAERRAQKRANRSEEAELRRKLGRKL
TAAEKTTIALQRHHPELRDVWGDLETRVKPITPIKADQPEELKIDLLPFQLESLYWMREQ
EKGEWHGGMLADEMGMGKTIQTLALLATDGKKPNLIVAPTVAIMQWRNEIEAYTDGMKIA
IWHGASREANVKELQKYDVVLTTYAVLESAFRKQQSGFKRGGKIIKEKSPVHQIMWNRIV
LDEAHNIKERSTNTAKAAFELQSNYKWCLSGTPLQNRVGELYSLVRFLGGDPFSYYFCKK
CECKSLHWRFTDKRSCDECGHNPMQHTCFWNNEILTPIQKHGMAFTGRAAFKKLRILLDR
MMLRRTKLERADDLGLPPRTVIVRRDYFSEEEKELYQSLFTDAKRAFSTYVDQGTLLNNY
SNIFSLITRMRQMACHPDLVLKSKQNAKKFSLDDMGEATVCRLCNDIAEDAIQSKCRHIF
DRECIKQYINTSVERMPACPVCHIPITIDLDAPALEINEGISTTARQGILGRLDIDKWRS
SSKIEALVEELTNLRQKDATTKSIVFSQFVNFLDLIAFRLQRAGFTICRLEGTMSPQARD
ATIKHFMNNVHVTVFLVSLKAGGVALNLTEASRVYLMDSWWNPAVEFQAMDRIHRLGQHR
PVEAIKLVIEDSIESRIVQLQEKKSAMINATLSTDDSAMGRLTPEDVSIFQSNSGCNGY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaacgacgaggggcaagggtcaaggcaaggccgctgctgtcgacacagcttta
tttgcgtcgttggcagacgtacgggcggcgagacgatctgcagctgcggaacgtcgcgct
cagaaacgtgcaaataggtccgaagaagctgagctgcgtagaaaactgggtcgcaagctg
accgctgccgagaaaacgacaatcgcgttacaaaggcaccaccccgaactacgtgacgtc
tggggagatctcgagacgcgtgtcaagcctatcaccccgatcaaggcagaccaaccagag
gagcttaaaattgatttgctgccgttccaattggagagcttgtactggatgcgggagcaa
gagaaaggggaatggcatggtggaatgctggcggacgaaatgggaatgggaaagactatc
cagactttggctctccttgcgacagacggcaagaagccgaatctgattgttgctccgacg
gtcgctatcatgcaatggaggaatgaaatcgaggcatacactgatggaatgaaaattgct
atatggcatggtgcttcacgcgaagcaaacgtaaaggaattgcagaaatacgacgtcgta
ctcacaacatatgccgtactggaaagcgcttttcggaagcaacaaagtggcttcaaacga
ggtggaaagataataaaagaaaaatcgcctgtgcaccagattatgtggaacaggatcgtg
cttgacgaggcacacaatattaaggaacgctcaacaaacactgcgaaggccgccttcgag
ctacagagcaactacaagtggtgtttgtcgggaactccgctgcaaaatcgtgttggagag
ctttacagtctcgttagattcctcggtggagatccattctcctattacttctgcaaaaaa
tgcgaatgcaaatctcttcactggcggttcactgataaaaggtcttgtgatgaatgcggc
cacaaccctatgcaacacacttgcttttggaataacgagattcttacacctattcaaaaa
catggcatggcttttactggtcgtgcggctttcaagaagttgcgaatcttgcttgataga
atgatgttgcgtcgaactaagcttgaacgggcggatgatcttggcctaccacctcgcacc
gtcatcgttcgtcgtgactatttcagtgaagaagagaaagagctatatcagtcgctcttt
accgatgctaagcgggcgttcagcacctatgttgatcagggcacactcttgaacaattat
tcgaatatcttcagcttaattacgagaatgagacaaatggcttgtcatcccgatttggtg
ttgaagagtaagcagaacgcaaagaaattctcgttggacgacatgggagaggccactgtt
tgccggctttgcaatgatattgcggaagatgcaatccagtcgaagtgcagacatatattt
gatcgcgagtgcattaagcagtatatcaatacttctgtggagagaatgcccgcgtgtccg
gtttgccacatcccgataacgatcgacctggacgctccagctcttgaaattaacgagggc
atctctactaccgcgcggcagggtatactcggtcgactcgatatcgacaaatggcgctcc
tcgtcgaagattgaggcgctcgttgaagaactcacgaacctcaggcagaaggatgcgaca
actaagtcgattgtcttctcgcagttcgtgaatttcttggatttgattgcatttagactc
cagagagccggattcacaatttgtcgccttgagggaacgatgtcgcctcaagctagagac
gcaactatcaagcatttcatgaacaacgtccacgtcactgtcttcctcgttagtctcaaa
gcggggggcgtcgctctcaacttgactgaagcttcgcgtgtgtacctgatggacagctgg
tggaacccagcagttgaattccaggcgatggaccgtatccaccgtttgggccaacaccga
cccgtcgaagctatcaagctcgtcatcgaggatagtatcgaatcacgtatcgtccagctg
caagagaagaaatccgctatgatcaatgcaacgctgtcgacggatgatagtgcgatgggg
aggttgactcccgaggatgtaagtattttccagagtaactccggatgtaacggatattaa
DBGET
integrated database retrieval system
