Flavobacterium nakdongensis: RF683_01905
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Entry
RF683_01905 CDS
T10681
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd00300
Lysine biosynthesis
fnd00550
Peptidoglycan biosynthesis
fnd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RF683_01905
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RF683_01905
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fnd01011
]
RF683_01905
Enzymes [BR:
fnd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RF683_01905
Peptidoglycan biosynthesis and degradation proteins [BR:
fnd01011
]
Precursor biosynthesis
Amino acid ligase
RF683_01905
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
DUF3440
Motif
Other DBs
NCBI-ProteinID:
WMW78220
UniProt:
A0ABY9RD42
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Position
422972..424435
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AA seq
487 aa
AA seq
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MKIAKDILYKVPIEAVHGSTSITINKIEFDSRKIELNDVFVAIKGVLSDGHLFIEKAISL
GAKLIICETFPAVFTEGVTYVKVISSNAALAHLAANYYDNPSSKLKLVGVTGTNGKTTIA
SLLYQLFKRAGYKVGLLSTVKIVVDETIYGATHTTPDSLTINHYLNEMVETGCEFCFMEV
SSHGIHQKRTEALCFEGGVFTNLSHDHLDYHKTFAEYRDVKKEFFDHLPKTAFALTNADD
KNGAIMLQNTHARKKTYALKSYADFRAQILENQLSGLLLKINNDEVWVKLIGSFNAYNVL
AIYGVALELGLENVEALRLLSELESVSGRFQYFISDTKITTIIDYAHTPDALENVLKTIE
DIRTKNEQLITVVGCGGDRDKTKRPIMANIASSLSNTAIFTSDNPRTEDPQTIIDEMEAG
VEGQNFKKTVSILDRKQAIKTACQLAKPGDIILIAGKGHETYQEINGVHQDFDDLKIAKE
LIQQLGK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctaaagacatattatataaagtgcccattgaagccgtgcatggttcaaca
agcattactataaataagattgaatttgattctagaaagatagaattaaatgatgtcttt
gtagctataaaaggagtactatcagacggacatttatttattgaaaaagcaatttcatta
ggtgccaaattaataatctgtgaaacgtttccagcggtctttacagaaggcgttacttat
gttaaagttatcagttcaaatgcggcattagcacatttagccgctaattactatgataat
ccttcttcaaaattaaaattagtaggcgttacaggtacaaacggaaaaacgacaattgca
tcattgctgtatcaattatttaaaagagcagggtataaggtaggattgctatctacagtt
aaaattgtagttgatgaaacaatttatggtgctacacatactaccccagattcgttaact
atcaatcattatttaaacgaaatggttgaaacaggttgtgaattttgctttatggaagta
agttctcatggtattcatcaaaaacgaacagaagctttgtgttttgaaggcggtgtattt
actaatctttctcatgatcatttagattaccacaaaacatttgcagaatatagagatgtt
aaaaaagaattttttgatcatttgcctaaaacagcttttgcattaacaaatgcagatgat
aaaaatggcgcaataatgcttcaaaatacacatgctcgaaaaaaaacgtatgccttaaaa
agttatgccgattttagagcccaaatattagaaaatcaattgtcaggattgttactaaaa
attaataatgatgaggtttgggtaaaattaattggctcatttaatgcgtataacgttttg
gcaatatatggtgtggcgcttgaattaggtttggaaaatgtagaagctttacgtttactt
tcagaattagaaagcgtttctgggagatttcaatattttatttctgatacaaaaatcact
acgattatcgattatgcgcatacgccagatgcattggaaaatgtattaaaaacaatagaa
gatattcgtacaaaaaatgagcaacttatcacagttgtgggctgtggcggagacagggat
aaaacgaaaagaccaattatggcaaacatagcttcatcattaagcaatacagccatattt
acatcggataaccctagaaccgaagatccgcaaactattattgatgaaatggaggcaggt
gtagaaggacaaaattttaaaaaaacagtatctattttagatagaaagcaagctattaaa
accgcttgtcaactagcaaaaccaggcgatatcattttaattgcaggtaaaggtcatgaa
acatatcaagaaattaatggagtgcatcaggatttcgatgatttaaaaattgccaaagaa
ctcatacaacaattaggaaaataa
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