Fusobacterium necrophorum subsp. funduliforme: BSQ88_06565
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Entry
BSQ88_06565 CDS
T06168
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSQ88_06565 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_06565 (nth)
Enzymes [BR:
fnf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSQ88_06565 (nth)
DNA repair and recombination proteins [BR:
fnf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSQ88_06565 (nth)
Prokaryotic type
BSQ88_06565 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
AYV93338
UniProt:
A0A162IIH4
LinkDB
All DBs
Position
complement(1387064..1387705)
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AA seq
213 aa
AA seq
DB search
MDKKQRVREVLKRLEEKFGKPKCALDFKSPFELLVAVILSAQCTDVRVNIVTKQMFPHVN
TPEQFANMEVEEIEEWIRSTGFYHNKAKNIKKCSQQLLELYGGEVPQDMDKLVNLAGVGR
KTANVVRGEIWGLADGITVDTHVRRLSNLIGFVQEEDPIKIERELMKIVPKKSWIDFSHY
LILQGRDTCIARRPRCNQCEISEFCKGKKIIDK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaacaaagggtgcgggaagttctaaaacgcttggaagaaaagtttgggaaa
ccgaagtgtgctttggacttcaagagtcctttcgaattgttggtcgctgtaattttatca
gcacagtgtacagatgtcagggtcaatattgtaacgaagcaaatgtttccccatgtgaac
actccggagcagtttgccaatatggaagtggaagaaattgaagagtggattcgtagtacg
ggattttatcataataaggcaaaaaatatcaaaaaatgcagtcaacaattattggaatta
tatgggggagaagttcctcaagatatggataaacttgtgaatctggcaggagtaggaagg
aaaacggcaaatgtggttcgtggagaaatttggggcttggcggacggaattacggtggat
actcatgtaaggcgtttgagcaatttgattggattcgtgcaggaggaggatcccattaaa
attgaacgagagttgatgaaaattgttcctaaaaaatcttggattgacttttctcattat
ttaattttacaggggagagatacctgtattgcaaggcgaccgcgttgcaatcaatgtgag
atttcagagttttgcaaagggaaaaaaataattgacaaataa
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