Frankliniella occidentalis (western flower thrips): 113213546
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Entry
113213546 CDS
T07591
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04013
MAPK signaling pathway - fly
foc04120
Ubiquitin mediated proteolysis
foc04140
Autophagy - animal
foc04144
Endocytosis
foc04214
Apoptosis - fly
foc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113213546
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
113213546
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113213546
04140 Autophagy - animal
113213546
09143 Cell growth and death
04214 Apoptosis - fly
113213546
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113213546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113213546
04121 Ubiquitin system [BR:
foc04121
]
113213546
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113213546
Membrane trafficking [BR:
foc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113213546
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113213546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-rbx1
U-box
RING_XB3-XBAT31
Sina_ZnF
zf-TRAF
zf-Nse
zf-ANAPC11
HIP1_clath_bdg
zf-RING_6
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113213546
NCBI-ProteinID:
XP_026288439
UniProt:
A0A6J1T4C7
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MDTKGEQAAGDGPQENVVPASDSPYQSRSQLDPRYECPICLSCLKEPVLTSCGHRFCKEC
IYMWLKREGSCCPIDNRPLTADSDLFVDNYTRREIAQTRLECPNAGYGCKVVLQPIDLEN
HIPSCSFQRTGSGKNSLHCTFENVGCRTTISSADELASHLESNLQQHLNLLSMAYTKLLD
LSKTQTMNGKAEEANSMWDPQPKGNSVAGSTTATVGNSNAGETHWPELIRALYEKVVLLE
QKGYEQTIEMNNLKQQLATSNARLERVRHELATTHCGGIYIWRVPNFREQLTAMTRDPLL
MLYSPAFYTSQYGYRFCLRLNLSAKNRSHLAVLVHLMRSENDVTLDWPFSGRMSLKLIHP
TDPQRHLKETMMSRPELEAFRRPRHEICPRGFGYTEFVKVSDLLSIGFLGETDTLVLRVQ
VQCV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatactaaaggagagcaagctgcaggagacggacctcaagaaaacgttgtgcctgca
tcagactctccctatcagagtcgaagtcaactagaccctcgttatgaatgtcccatctgt
ctatcgtgtctgaaagagccagttttgacatcatgtggtcacagattttgcaaggaatgc
atttacatgtggctaaagcgagaaggaagctgctgtccgattgataatcgacctcttact
gcagactcagatctctttgtagacaactataccagaagagaaattgctcaaactcgcctt
gaatgtccaaacgcaggatatggttgtaaagttgtattacaaccaattgaccttgaaaat
catattcccagttgctcttttcagagaacaggctctgggaaaaactccttgcattgtact
tttgaaaatgtgggctgtcgcaccacaattagcagtgctgatgagctagcctcccatctc
gaatcaaaccttcaacagcacctgaacctcttgtcaatggcttatacaaagctgttggac
ctatctaaaacccaaacaatgaatggtaaggctgaggaggccaacagcatgtgggatcct
caaccaaaagggaacagtgtggctggctccacaacagcaacagttgggaattccaatgca
ggcgagactcattggccagagctcataagggctctttatgaaaaagttgttcttctagaa
cagaaagggtatgagcaaaccatagaaatgaacaatttgaaacaacaacttgccacaagt
aatgcgcgacttgaaagggtaagacatgaattggcaactactcattgtggaggcatttac
atatggagggttccaaacttcagagaacagttgacagctatgacaagagaccccctcctc
atgttatacagcccagctttttacacatcacaatatggatacagattctgcctacgactt
aatttgtcagcaaaaaatagaagtcatcttgctgtcctagtccacctgatgcgtagtgaa
aatgatgtaacactggattggcctttctcaggccgaatgtctctgaagcttatccaccct
actgatcctcaacgccatcttaaggaaactatgatgtctcggccggaacttgaggcattc
agacgtcctaggcatgaaatctgtccaagaggctttggttacacagaatttgttaaagtt
tctgatttgctcagtattggtttccttggtgaaactgatactctagtcttgagagttcaa
gttcagtgcgtgtga
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