Formosa sediminum: FNB79_06405
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Entry
FNB79_06405 CDS
T06103
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fop
Formosa sediminum
Pathway
fop00300
Lysine biosynthesis
fop00550
Peptidoglycan biosynthesis
fop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FNB79_06405
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FNB79_06405
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
FNB79_06405
Enzymes [BR:
fop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FNB79_06405
Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
Precursor biosynthesis
Amino acid ligase
FNB79_06405
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Paralog
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
YqeC
DUF3440
MobB
LpxK
Motif
Other DBs
NCBI-ProteinID:
QDO93622
UniProt:
A0A516GQ38
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All DBs
Position
1468696..1470159
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AA seq
487 aa
AA seq
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MSLLKDILYKVAIDTVVGATNIHVNNIAFDSRKIELNDVFVAISGTVADGHGFIETAINK
GALVVVCEHIPEQRVNGVTYIKVEDTKVALAIMASNFYQNPSENLKLVGVTGTNGKTTIA
TLLYQLFKAAGYKVGLLSTVKILINDTVYPATHTTPDSLNINAYLSLMNQEGVEFCFMEV
SSHGIHQKRTEGLHFVGGVFTNLSHDHLDYHNTFAEYRDVKKTFFDQLPKTAFALVNVDD
KNGEVMLQNTKAAKYTYGLKNYADYRAQILENQFTGLLLKINDNEVWSRLIGHFNASNLL
AIYGVAELLGLENDETLRLISGLESVTGRFQYLISDSKITAIVDYAHTPDALQNVLETIN
SIRTKNEDLITVVGCGGNRDKTKRPKMGRIAAAMSTKVVFTSDNPRFEDANAIIEEIEQG
VEPMYFKKTMSISDRRQAIKTACQLAQPNDIILIAGKGHETYQDIKGERFDFNDFEIVNQ
YLKQLEK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttattaaaagacatattatataaagtagctatagatactgttgttggggcaacc
aatatacatgtaaataatattgctttcgattcaagaaaaattgagttgaatgatgtgttt
gtggcaatttcaggaactgtcgcggatggtcatggttttattgaaacggctataaataaa
ggtgctttagttgtagtctgtgaacacataccagagcagcgtgtaaatggagttacttat
attaaagttgaagatactaaagtggctttagcaataatggcttctaatttttaccaaaac
ccttcagagaatttaaaacttgtaggtgtaacagggactaacggaaaaactactattgca
acgttattatatcaattatttaaagcggctggttataaagtagggttgctttcaacggtt
aaaattttgataaatgatacggtgtatcctgctacacataccactccagattcgttaaac
atcaatgcgtatttaagtttaatgaatcaagaaggtgttgagttttgttttatggaagtg
agctcgcatgggattcatcaaaaacgtacagaggggcttcattttgtaggaggagtcttt
acaaacttgtcgcacgatcatctagattatcacaatacatttgctgagtatcgtgatgtt
aaaaaaacatttttcgatcagttgccaaaaacggcttttgcgcttgtaaatgtagatgat
aaaaatggagaagtgatgcttcaaaatactaaagctgcaaaatatacttacggattaaaa
aattacgccgattatagagcacagattttagaaaatcaatttacaggattgctattaaaa
atcaatgataatgaagtttggtctagattaatcggacattttaatgcttctaatttattg
gccatttacggtgtagcagaattgctaggcttagaaaatgatgaaacgttaagattgata
agtggattagaaagtgtgaccggaagatttcagtatttaatttcagattcaaaaattaca
gccattgtagattatgcacatacgccagatgctttacaaaatgtattagaaacgataaac
agtattagaactaaaaatgaagatttaattactgttgtgggttgcggaggaaatagagat
aaaaccaagcgccctaaaatgggacgtattgctgctgctatgagtaccaaagtggtgttt
acaagtgataatcctaggtttgaagatgctaatgctattattgaagaaatagaacaaggt
gtagagcctatgtattttaaaaaaacaatgtctatttcagacagaagacaagctattaaa
acagcttgccaattagcgcagcctaacgatataatattaattgcaggtaagggtcatgag
acttaccaagatataaaaggagagcgtttcgattttaacgatttcgaaattgtaaatcaa
tatttaaaacagctagagaaataa
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