Formosa sediminum: FNB79_08660
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Entry
FNB79_08660 CDS
T06103
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fop
Formosa sediminum
Pathway
fop01501
beta-Lactam resistance
fop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FNB79_08660
01503 Cationic antimicrobial peptide (CAMP) resistance
FNB79_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fop03036
]
FNB79_08660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_08660
01504 Antimicrobial resistance genes [BR:
fop01504
]
FNB79_08660
Chromosome and associated proteins [BR:
fop03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FNB79_08660
Transporters [BR:
fop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNB79_08660
Antimicrobial resistance genes [BR:
fop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FNB79_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_RND
YknX_C
HH_YBHG
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
HH_MFP_RND
BSH_YknX
Biotin_lipoyl
CzcB_C
YqfD
Beta-barrel_AAEA
Beta-barrel_AprE
Beta-barrel_YknX
GAS
RND-MFP_C
Peptidase_M23
BSH_LcnD
Beta-barrel_ALG44
Beta-barrel_RND_rel
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
QDO94046
UniProt:
A0A516GRA1
LinkDB
All DBs
Position
complement(1976430..1977512)
Genome browser
AA seq
360 aa
AA seq
DB search
MKTYTYIIAAIALSIFTTSCGNDEKKVTADTTPPIPVKVSAIQENTKHPFVTASGKIQAK
NSADLSTRIMGYVNSIPVNVGDKVKKGQLLISINNTDLQAKSAQIDAGITEATVAFNNAE
KDYNRFQNLFADNSASQKELDDMTANYEMAKARLEAAKQMKNEVNSQFAYANIKAPFTGI
VTSKTIEVGDMATPGMPLISVETPGLFEVIASVPESEISEIKTGTKVQVNVKSINKIISG
IVTEVSTSAKHTGVQYLVKVALNSTDAPILSGMFTTVQFPVAKKATTTSMILIPKSALVT
RGQLTGIYTASQSGTAVLRWLRLGRTYGDTIEVLSGLSANESYIVSAEAKLFNGAKISIQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatacacctatataatcgccgcaattgcattatcaatattcacaacaagttgt
ggtaatgatgagaaaaaagtaacagcagacacaacaccaccaatacccgtaaaagtaagt
gctatacaagaaaacacaaagcatccttttgtaacggctagcggaaaaattcaagcaaaa
aacagtgcagatttaagcacgcgtattatgggctatgtaaatagtattcctgtaaacgtt
ggcgataaagtaaagaaaggccaattattaatatctataaacaacaccgatttacaagct
aaaagtgctcagatagatgctggtattacagaagctacagtggcttttaataatgcagag
aaagactataaccggtttcagaatttatttgcagacaacagtgcctctcaaaaagagtta
gacgatatgactgcaaattacgaaatggctaaagcccgattagaagctgctaaacaaatg
aaaaacgaagtgaactctcagtttgcatacgctaatataaaagcaccttttactggaatt
gtaaccagtaaaactattgaagttggcgatatggcaactcctggtatgcctttaatttct
gtagaaactccaggtctttttgaagtgattgccagcgtacctgaaagtgaaatttctgaa
attaagacaggtactaaagtgcaagttaatgtgaaatctattaacaaaataatttctgga
atagttacagaagtcagcacatctgcaaaacatacgggcgtacaatatttagtaaaggtt
gctttaaacagtacagatgctcctattttatcgggaatgtttacaacggttcaatttcct
gttgctaaaaaagcaacgacaacgagtatgatattaattcctaagtctgcactagtcact
cgcggacaacttactggaatatatacagcaagccaaagcggaactgccgttttacgttgg
ttacgtttaggccgtacatatggagacacgattgaagtgttatctggtttatctgcgaat
gagtcttacatcgtatctgccgaagcaaaattatttaatggtgccaaaatttcaattcaa
taa
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