Formosa sp. Hel1_33_131: FORMB_03990 Help Entry FORMB_03990       CDS       T04465                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism for  Formosa sp. Hel1_33_131 Pathway for03030   DNA replication for03410   Base excision repair for03420   Nucleotide excision repair for03430   Mismatch repair Brite KEGG Orthology (KO) [BR:for00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FORMB_03990    03410 Base excision repair     FORMB_03990    03420 Nucleotide excision repair     FORMB_03990    03430 Mismatch repair     FORMB_03990  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:for03032]     FORMB_03990    03400 DNA repair and recombination proteins [BR:for03400]     FORMB_03990 Enzymes [BR:for01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FORMB_03990 DNA replication proteins [BR:for03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FORMB_03990 DNA repair and recombination proteins [BR:for03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FORMB_03990    NER (nucleotide excision repair)     GGR (global genome repair) factors      FORMB_03990    MMR (mismatch excision repair)     DNA ligase      FORMB_03990   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FORMB_03990 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 Nlig-Ia BRCT HHH_5 DNA_ligase_ZBD BRCT_2 PTCB-BRCT Auto_anti-p27 HHH Motif Other DBs NCBI-ProteinID:  AOR27460 LinkDB All DBs Position complement(450133..452127) Genome browser AA seq 664 aa AA seqDB search MDIKEQILQLREALSQHNYNYYVLDEPSISDFEFDTKLKQLQDLEAAYPQYYDASSPTLR VGGAVTKNFETIVHAQRMYSLDNSYSKEDLMDWETRLRKMVDGAIAYTCELKYDGASISL TYENGLLVQALTRGDGTQGDNVTANIKTIKSVPLKLRGDYPDKFEIRGEIVLPFEGFNAM NAERIAAGEEPYKNPRNTASGSLKLQDSAEVAKRPLECLLYSIVGENTDLKTQFENLEKA RSWGFKVPTIAKLTDSIDGVLEFVNYWDIHRHELPYETDGVVVKVNSLFQQAELGYTAKA PRWAMAYKFKAEQVSTRLEHISYQVGRTGAITPVANLQPVELAGTIVKRASLHNADQIEK LDVRVGDWVYVEKGGEIIPKIMGVDLERRAADTPKTVYLTACPECETPLVRKEGEAHHYC PNDKGCSPQIIGRIQHYISRKALDIEGLGGETVALLVNEGLILDYADLYELTTDQIIHLD RMAEKSADNLVNGVQASKDVPFERVLFGLGIRYVGETVAKKLAKHYKSIEALSKATLEDL ETVDEIGIRIAESVVDFFSKEANIQMVSRLILYGLQLQLSEEALSNQTTQLEGLRFVVSG VFETVSRDELKALIDSNGGKVVSSISAKTSYVVAGANMGPSKRTKAESLKVPIISEPEFL EMLS NT seq 1995 nt NT seq  +upstreamnt  +downstreamnt atggatattaaagaacagattttacaacttcgagaggcgctaagtcagcataattataac tattatgttttggatgaaccgtccatttctgactttgagtttgacaccaagttgaaacaa ctccaagacttagaagcagcatatccacagtattatgatgccagttcgccaaccctcaga gtgggcggtgctgtcactaaaaactttgaaaccattgtgcatgcccaacgcatgtactct ttagataattcctattccaaagaagatttgatggattgggaaacccgattacgaaagatg gtcgatggtgccattgcatatacttgtgagttgaaatacgacggcgcgtctatcagtctc acctatgaaaacgggttgcttgttcaggcgttgacacggggcgatggtacgcaaggtgac aatgttacggcaaacattaaaaccattaaatccgtgcctttaaaattacggggcgactat ccagacaaatttgaaattcgtggtgaaattgttcttccttttgaaggctttaatgccatg aatgccgagcgcatcgccgcaggggaggaaccttataaaaacccacggaacaccgcttct ggaagtttaaaattacaagatagcgccgaggttgccaaacgccctttggagtgtttgttg tacagcattgtgggtgaaaataccgatttaaaaacccagtttgaaaatcttgaaaaagca cgttcttgggggtttaaagtccccaccattgccaagcttaccgactccattgatggggtg ttagaatttgtcaactattgggacatccaccgtcatgaattgccttacgaaacagatggt gttgtggtgaaagtgaacagtttatttcaacaagccgagttgggctatactgccaaagcc ccgcgttgggcgatggcttataaatttaaagcagagcaggtttctacacgcctcgaacac atttcgtatcaggtggggagaacgggggcgattacacccgtggcgaatcttcagcctgtg gaattggcaggaacgattgtgaaacgtgcttcgctccacaatgccgatcaaatagaaaaa ttagacgtccgcgttggcgactgggtctatgtcgaaaaaggcggtgaaatcattcctaaa attatgggggtcgatttggaacgtcgtgcggcagatacacccaaaacagtgtacctcacc gcctgcccagaatgtgaaacaccactcgttcgaaaagaaggggaggcacatcattattgt ccgaatgacaagggctgttcgcctcaaattattggacgtattcaacattatatttcccga aaagccttggacatcgaaggtttgggtggcgaaaccgtggccttattggtcaatgaggga ttgatccttgattatgccgatttatacgagctgacaacggatcagatcatccacctcgac cgcatggcagagaaaagcgccgataacttagtcaacggcgttcaagcctctaaagacgtc ccttttgaacgggtcttgtttggactgggcattcgctatgtaggagaaacggtggccaaa aaattagccaaacattacaaatccatagaagccttgtccaaagccactttggaagattta gaaacggtggacgaaatcggcattagaattgccgaaagtgtagtggatttctttagtaag gaagcaaatattcaaatggtatctcgtttgattttatacggcctccaattgcaactgtca gaagaagctctgtccaatcaaaccactcagttagaagggctgcgttttgtggtgtctggt gtgtttgaaacggtctctcgtgacgagctcaaagccctcatcgattccaatggtggaaag gtggtgagttctatttcagccaaaacctcctatgtggtagcaggtgccaatatgggaccc agcaagcgcaccaaagccgagagcctcaaagtgcctattatttctgaacccgagtttttg gagatgctgagttaa

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