Fusarium oxysporum: FOXG_01794
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Entry
FOXG_01794 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fox
Fusarium oxysporum
Pathway
fox03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FOXG_01794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_01794
Enzymes [BR:
fox01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FOXG_01794
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FOXG_01794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
28944035
NCBI-ProteinID:
XP_018234794
UniProt:
A0A0J9UBQ3
LinkDB
All DBs
Position
5:2175094..2179368
Genome browser
AA seq
1011 aa
AA seq
DB search
MPLPFSLVCELLEQSFLLSLDKKSCSNTVTKWFTRHRNYVDAHDTNLPALLSTLLPEKRT
DRVYCIQSASLERIIGRAYLLGSSRIKELAQYRQPGSGVDLADCVFRILTVTPSPSYDHK
NLVTVEEIDQLLHSLAAKIKWSSPSIRASQASLTPSNRTDLESLYRRLSATEAKWFTRLI
LKSYQPLVIDPHLIYRLCDPILPCVVKIQDDFATAITSLQAIRGRLLPNAGRKTPREQIM
GTVKPQLGVKIGRQPWVKGRSIKHCLDMGHGRMSVEEKIDGEYCQIHVDPSKGDKCIQIF
SKSGKDSTEDRVALHGIIQESLKIGQPDTRVKKACILEGELVVYDDSQEKILPFHRIRKH
VSRRRRFVNTELDSLPGPQEHLMIIYYDVMLLEDQSLINLRHSERFKILSNLVCCRKGWA
GLVPRQVIDFGQPLGASTLRKAFAMAILAWKEGLVLKPDEPYFDFTDQRRRFSSCCIKLK
KEYIGNFGDVGDFSVVGARYDSTKALSYRIPGLKWTHFYIGCLDNREAVKSWGAKPEFTI
VNVVELNETILREVVIYSNPEPVSPDDNGALALKLAPGVEQGSPPTFIFTKPLVFDLKCF
SFDRVGNTGFWSLRFPSVTKVHFDREFTDTISFEQLQALAKEATTAGKLEDSQENLQWIA
KLEAADPRGIAVDAASQLTVTTMPTPSPRKSTQNTTSTWSPKSPLATKSPVRVSPCRGRR
ERVHRAPSLDLPSITATTSLRTEPSSPTKLCAKHKRGLPSTGPTSQHKRLKSSSETSISQ
NDYPHIDIASQPRAPLAARDNNPRPQPVKSSCAPCCPSSPSESFFDESSNSDGINAEVVK
SIINPGTGELQTETNPERLKPSTTKVTTALKRKCVYAGEDCMLANAVVLFLPGLLAMKEA
KKLLAQHGVDAPVTDIDTWLKAEKEARQKGKITIPSKAYVVCDSDNKLVFKHLAEKFKEL
RKDTLFNKGTHIEIHDWRFLSYLTTQEDESIEEKYFHGFSDWRMRWKLHTI
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccattctctttggtctgtgaattactcgagcaatccttccttctttctctt
gataagaagagttgctcgaacactgtcacaaagtggttcactcgccatcgcaactacgta
gatgctcacgatacgaacctcccggcgctgttatcgacacttcttcctgaaaaaaggacc
gatcgagtttactgtattcaatctgccagcctggagagaatcattggccgtgcatatcta
cttggctcgtcaaggattaaggagttagctcagtaccgccagccagggtctggtgtcgat
ttggcagactgtgtttttcgcatcctcacagtcacaccaagccctagctacgatcataaa
aaccttgttacagttgaagaaattgaccaacttcttcattctctcgcggctaaaataaaa
tggagctccccctcgattcgtgcctcacaggctagcctgactccaagcaacaggactgat
cttgagagcctctacagaaggttgagtgcaacagaggcaaaatggttcacgcggcttatt
ttgaaaagctaccagccgctcgttatagacccgcacctcatatatcgactgtgtgatcct
attttgccctgcgttgtgaagatacaggatgattttgctactgcgatcacttcccttcaa
gcaatacgaggaaggcttcttccaaatgctgggcgcaaaacaccacgcgaacagatcatg
ggcacagtcaaacctcaactgggtgtcaaaattggacgacaaccttgggtcaagggacgt
agcattaagcattgtctagacatgggccatgggcgcatgagtgtggaggaaaagattgat
ggcgaatactgtcagatccacgtcgacccaagcaaaggggataaatgcatacagatattc
tcgaagagcggcaaagatagcacagaagatagagttgcacttcacgggatcatacaagaa
tcactcaaaattggacagcccgacacccgagtcaagaaagcgtgcatattggaaggggaa
ttggttgtatatgacgattctcaggagaagatacttccgtttcaccggattaggaagcat
gtatcacgaagaagaaggtttgtgaacacagagctagactccttgcctgggccccaggaa
cacctcatgataatttattacgacgttatgcttttggaagatcagtctctgatcaatttg
aggcattcagagagattcaagatcctctccaacctcgtttgttgccgtaaaggatgggcg
ggcctcgttccgcgccaagtcattgattttggacagcctctgggagcctcaactcttcgt
aaagcttttgccatggctattttggcttggaaagaaggccttgttttgaaaccagatgag
ccatatttcgactttacagaccagaggcgaaggttttcgagctgctgcatcaagctcaaa
aaggaatacattggcaattttggagatgttggcgacttttcggttgtcggtgccagatat
gactcgacaaaagccttgagttaccgaattccagggctcaagtggactcatttctacatt
ggctgcctggacaacagagaagcagtcaaaagctggggcgctaagccagaattcaccatc
gtcaatgttgtagagctgaacgaaactatcttgagagaagttgtcatttattcgaacccg
gagcctgtttctcccgacgacaatggggcactggctctcaaactggctcctggggttgaa
caaggttcaccgccgacgttcatattcactaaaccattggtatttgatttgaaatgcttc
agctttgaccgagtgggaaacactggcttctggagtctcagatttccttcggtgacgaaa
gttcactttgaccgggaattcactgacaccatatctttcgagcagttgcaggcgctggcg
aaggaggctacgactgccggcaaattagaagatagccaggagaatctacagtggattgca
aaactcgaagcagctgaccctcgcggtattgctgttgacgctgcgagccagttgacagtg
actactatgccaacaccgtcgcctcgcaaatcaacacaaaataccacctctacatggtct
ccgaagtcgcccttggctacaaaatcaccagttcgagtcagcccttgccgcggccgacgg
gaaagagtccacagggccccatctttggatttgccttccataacagcgacaacatctttg
cggactgaaccatcgtcaccaacgaaattgtgcgccaaacacaaacgtggcctgccctcc
actggaccaacttcgcagcataaacgcttgaagagtagcagtgaaacatcgataagccaa
aacgactacccacacattgatattgcttcacaaccacgcgcacctctcgccgccagggac
aacaacccgcgacctcagcccgtcaagtcttcttgcgcaccatgctgtccttcctctccg
agcgagagcttctttgatgaatccagcaactccgatgggatcaacgctgaagtcgtaaag
tccatcatcaatccaggcactggcgagcttcagacagagaccaaccccgagcgcctgaaa
ccgtcaacaaccaaagtaacaacggcattgaaaaggaaatgtgtctatgctggcgaagac
tgcatgcttgcaaacgcagttgtactctttttgccaggccttctcgccatgaaagaagca
aaaaaacttctcgctcagcatggtgttgacgcccctgtcactgacatcgacacatggctc
aaagccgagaaggaggccagacagaaagggaaaatcactattccttcaaaggcttatgtt
gtgtgcgatagcgacaacaaacttgtgttcaagcacctagcggaaaagttcaaggagctt
cgtaaggacactcttttcaacaagggcacgcacatcgaaattcacgactggcgctttttg
tcctatctcacgacacaagaagacgagtctatcgaagagaagtactttcatgggttctct
gactggcgcatgcgttggaagcttcacactatctga
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