Flavobacterium pallidum: HYN49_06465
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Entry
HYN49_06465 CDS
T06077
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
fpal
Flavobacterium pallidum
Pathway
fpal01501
beta-Lactam resistance
fpal01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN49_06465
01503 Cationic antimicrobial peptide (CAMP) resistance
HYN49_06465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpal02000
]
HYN49_06465
01504 Antimicrobial resistance genes [BR:
fpal01504
]
HYN49_06465
Transporters [BR:
fpal02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HYN49_06465
Antimicrobial resistance genes [BR:
fpal01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN49_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Patched
WS_DGAT_C
Motif
Other DBs
NCBI-ProteinID:
AWI25565
UniProt:
A0A2S1SGQ5
LinkDB
All DBs
Position
1607460..1610639
Genome browser
AA seq
1059 aa
AA seq
DB search
MLQKFIDRPVLSTVIAILIVILGTIGLTTLPLQQFPDIAPPAVQVVALYPGANAETVLRS
VAPSLEEAINGVENMSYMSSTASNDGSLVITVNFKLGTDPDQAAVNVQNRVSQATSQLPA
EVVQAGIQTTKKQNSLLMVVDLYSDNEAQYDQTFLNNYAQINIIPDIKRIPGVGQAIIFG
GNKDYSMRVWLNPAKMANYKISAQEVLAAIQDKNLEAAPGRFGESSKQAFEYVIKYKGKL
NNPGEYENIVIHSDADGSVLRLKDVARIEFGSYSYGSGTRIDGKQGLNIGIFQLPGSNSS
DVQIAIREMMEKASKDFPKDVKHLILYNTKDSLDMSISQVKSTLIEAFILVFLVVFLFLQ
DFRATLIPAIAVPVSILGTFFFMQIFGFSVNLLTLFALVLAIGIVVDDAIVVVEAVHEKM
HSKRLSAKAATTSAMSEITGAIISITLVMSAVFLPVGFMEGSTGVFYRQFAFTLAIAIVI
SAVNALTLSPALAALFLKDLPHDGHASEGHAEPKPKSFKEKFFIGFNSGFNKLTDKYVKS
LRFLIKYKSISLGGLAVIILATVYMVKTTPTGFIPSEDQGFIAISMSMPAGASLDRTQTV
MKEVEGTLGNLPSKKVLNIISGFNMLTSSTSSSAGVAFILLKPAKERGELQDINDIMNDV
RGRLAGVKGANFFVFTFPTVPGFSNVDALDIVLKDKTGGSISKFSGVSNAFIGELFKRPE
IAVAFTSFKADFPQLEMEVDDVKAEQLGVRVRDILQTMQTYYGSAQASDFNRFGKYYRVM
VQADAAARTSPESMNNIFVKNKFGEMVPVSSLVTLKHVNGPETASRYNLFSSIGINAIAK
PGFSSGAAIKAVQEVAETKLPKGYTIEFSGLTNEEITSSGQSAMIFGLSLLFVFFLLAAQ
YESYILPAAVILSIPTGIFGVFAAIGMTGIENNIYVQVALIMLIGLLAKNAILIVEYALQ
RRRAGKSLLASALEAAKLRLRPIIMTSFAFVVGLIPMMRATGPSALGNHSISIGAAGGMI
SGVVLGIFIIPVLFIIFQYLQEKVTGVPLAVLNNEKHSH
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgttacagaaattcattgacaggccagtactgtcgacagtcatcgctattcttatagtg
atcctgggaaccatagggcttaccacgctccctttacaacaattccccgatattgcaccg
ccggcggtacaggtggtggccctttatccgggtgcgaatgctgaaaccgtattgcgctct
gtggcgccttcgcttgaagaagccattaacggcgtggaaaacatgagctatatgagttct
accgcgagtaatgacggttcgttagtgattaccgtaaacttcaagcttggtaccgatccg
gatcaggcggctgtaaacgtacaaaaccgcgtgtcacaggctacaagccaattgcccgcc
gaagtcgtccaggcgggaatacaaaccaccaaaaagcaaaacagccttttgatggtagtc
gatctgtattcagataatgaagcacaatacgaccagacgttcctgaacaattatgcgcag
atcaacatcatccctgacatcaagaggattccgggagtagggcaggccatcatctttgga
ggaaataaggattactccatgcgggtatggctgaatccggccaaaatggcgaattacaaa
ataagcgcgcaggaagtccttgcagccatccaggacaaaaaccttgaagcggctccaggc
cggtttggcgaaagtagcaaacaggcgtttgaatatgtgataaaatacaaaggaaaactg
aacaatccgggcgaatacgaaaacatcgtaatccattccgatgccgatggttctgtgttg
aggttgaaagatgtcgcccgcatcgaattcggttcgtattcctatggaagcggtacgcgc
atcgatgggaaacaaggcctgaatattggtattttccagttgcccggctcgaattccagc
gacgtacagattgccattcgtgagatgatggaaaaggcttcgaaggattttccgaaagat
gtgaagcacctgatcctttacaatacgaaggattcgttggatatgtccatctctcaggta
aaatcaactttaattgaagcctttatattggtattccttgtcgtgttcctgttccttcag
gatttcagggcaactttgattcctgccatcgcggttccggtttcgattttaggaacgttc
ttcttcatgcagattttcgggttttcggtgaacttactgacgttattcgctttggttctg
gccatcggaattgtagtcgatgatgcaattgtagtcgtcgaggcggtccatgagaaaatg
cacagcaaaaggctctcagccaaagcggcgacgacttctgcgatgagcgaaatcaccgga
gccatcatatcgataaccttggtgatgtcggcggtattcttgcctgttggttttatggaa
ggctctaccggtgtgttttaccgacagtttgcctttacactggccattgcgatcgtcatt
tccgcagtcaatgcacttaccttaagtccggcactcgcagccttgttcttaaaagacttg
cctcatgatgggcacgcttctgaagggcatgcggaaccgaaaccaaaaagtttcaaagag
aaattctttatcggattcaacagcggcttcaacaaactgacggacaaatacgttaaaagc
cttcgtttcctgatcaaatataaatcaatcagccttggtggattggcagtaatcatttta
gccaccgtatatatggtgaaaaccacgccaacaggattcataccatctgaagaccagggg
ttcatcgccatatcgatgtcgatgcctgcgggagcatctttagacaggacccagactgtg
atgaaggaagtcgaagggaccttaggcaatctgccatcgaaaaaagtactgaacatcatt
tcaggtttcaacatgctcacaagttctacaagttcctcagccggagttgcatttatcctg
ttaaagccagcaaaagagcgtggtgaactccaggacatcaacgacatcatgaacgatgtg
cgcggcaggctggctggggtgaaaggtgccaatttcttcgtattcacgttcccgaccgtt
cccggtttcagcaacgtcgatgccctcgatattgtattgaaagacaaaacaggcggaagc
atcagcaaattcagcggtgtcagcaatgcgtttataggcgaattattcaaacgtcctgag
attgccgtcgccttcacgagtttcaaggcagatttcccacaattggaaatggaagtggat
gatgtaaaagcagaacaactcggcgtgcgcgtcagggatatcctgcaaaccatgcaaacg
tattacggtagtgcccaggcgtcggatttcaaccgtttcgggaaatattaccgcgtcatg
gtacaggccgatgctgcagcaaggacatcgcctgaatcgatgaataatattttcgtcaaa
aacaaattcggcgaaatggtgccggtaagttccctggtgacgcttaaacatgtcaacggt
ccggaaactgcttcaaggtacaacctgttcagttccatcgggatcaatgccatcgccaaa
ccgggtttcagttcgggagctgccattaaagccgttcaggaagtggccgaaaccaaattg
cctaaagggtatacgattgaattttcaggcttgaccaacgaagaaatcacctcttcaggt
cagtcggcaatgatattcgggctgagcttactgtttgtgtttttccttctggcggcacaa
tatgaaagctacatcctgcctgccgcggtcatcctgtctatcccgacaggtatcttcggg
gtgtttgcagccattggcatgaccgggatcgagaacaacatttatgtacaggtcgctttg
attatgctcatcgggttgctggcgaaaaatgccatccttattgtagaatacgcgctgcaa
agaagacgtgcaggtaaatcactgctggcatcagcacttgaagctgccaagctccgtttg
cgcccgattatcatgacctccttcgcgtttgtcgtcgggttgataccgatgatgcgcgcc
acagggccgtctgccttagggaaccattcgatcagtatcggtgctgcgggcggcatgatt
tcaggagtagtcctcgggatcttcatcatcccggtattgttcatcattttccagtattta
caggaaaaagtgaccggggtgccattggcagtattgaacaacgaaaagcattcacattaa
DBGET
integrated database retrieval system
