Flavobacterium panici: NLJ00_04975
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Entry
NLJ00_04975 CDS
T08520
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_04975
01503 Cationic antimicrobial peptide (CAMP) resistance
NLJ00_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fpb03036
]
NLJ00_04975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_04975
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_04975
Chromosome and associated proteins [BR:
fpb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NLJ00_04975
Transporters [BR:
fpb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLJ00_04975
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLJ00_04975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
BSH_YknX
BSH_LcnD
YknX_C
HH_AprE
Biotin_lipoyl
CzcB_C
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
UUF15466
LinkDB
All DBs
Position
1096823..1097977
Genome browser
AA seq
384 aa
AA seq
DB search
MNALKLPKPLFPILLLLIIFISCKKEKPKAPPPMQAPFVTVKSEDVPIYKDFAGQTFGDL
DIELIARVDGILTGIHFKEGQRVKKGQLLYTIDPLEYDTKVEQVRGQVAAAQSNLVNAEE
ELKRIRPLADMNAVSKRELDAAVAKEKAARSNYTSVQASLKNQQIERSYANIKSPIDGVI
GLSNARLGDYITKIGNESKLNTVSKLEKVRVQFTVSESNYLQYQKQVKDGERITDLQLIL
SDGSTHPYKGTLNFSDTKIDPTTGTVTIEAQFPNPEGTLRSGQFAKVRVLLRTQKDAIVV
PQKAVTEIQGLFQVSIIDDKNTIQTRMVEVGQKIGVDWIITKGLKPNEKVAIIGNQFIQP
GSTVVPVPYVAEKDKKQIASSLNN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttaaaactacccaaaccactcttcccaattcttttacttttaataattttc
atctcttgtaaaaaagaaaaaccgaaagcccctcctcccatgcaggcgccttttgtaacc
gtcaagagtgaggatgtccccatttacaaagattttgccggacagacttttggagattta
gacattgaattaatcgccagagttgacggaattctaactggaattcattttaaagaaggt
cagcgcgttaaaaaagggcaattattatacaccattgatccgctggaatacgatacaaaa
gtggaacaagtacgtggtcaggttgccgctgcacaaagtaatttagtgaatgccgaagaa
gaattaaaacgaattcggccgcttgcagatatgaacgctgttagtaaaagagaattagac
gcggctgtagccaaagaaaaagcagcccgatcaaactacaccagtgttcaggcaagttta
aaaaatcagcagatagaaagaagctatgccaatataaaatcaccaatcgacggtgttatt
ggtctttcgaatgcccgattaggagattatattaccaaaattggaaatgagtctaaatta
aacaccgtttcaaaactagaaaaagtcagagttcagtttaccgtcagcgaatcaaattat
ctgcaatatcaaaaacaagtcaaagacggagaacgaattactgatcttcaacttatactt
tctgatggaagtacacatccatacaaaggaactctcaatttctctgacaccaaaatagac
ccaacaaccggaaccgtaactatcgaagcacaatttccaaatccggaaggaactttacga
tccggacaatttgctaaagtccgtgttttactccgaacccaaaaagatgcgattgtagtt
cctcaaaaagccgtaaccgaaattcagggattattccaggtttctattattgacgataaa
aacaccattcaaacccgaatggttgaagttggacagaaaattggagttgattggattatt
actaaaggtttaaaacccaacgaaaaagtcgccattattggcaatcagtttattcagcct
ggatcaacagtagttccagttccctacgtagccgagaaagataaaaagcaaattgcatca
tctctaaacaactag
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