Flavobacterium panici: NLJ00_09525
Help
Entry
NLJ00_09525 CDS
T08520
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00300
Lysine biosynthesis
fpb00550
Peptidoglycan biosynthesis
fpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLJ00_09525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLJ00_09525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
NLJ00_09525
Enzymes [BR:
fpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NLJ00_09525
Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
Precursor biosynthesis
Amino acid ligase
NLJ00_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
MobB
DUF3440
CbiA
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
UUF16345
LinkDB
All DBs
Position
2167482..2168945
Genome browser
AA seq
487 aa
AA seq
DB search
MKILKDILYKVAIESVAGSTEVGIQKIEFDSRKVESNDIFVAIRGSLSDGHDYIEKAVQL
GAKAIICDTLPQNIEKEVTYIQVKDTNTALAFIAANYFEDPSSKLKLVGVTGTNGKTTIA
SLLFQLFQKAGFKVGLLSTVKIMVDDTEYPATHTTPDSITINNYLNEMIEAGVTHCFMEV
SSHGIHQKRTEALHFVGGIFTNLSHDHLDYHVTFAEYRDVKKSFFDSLPKTAFALSNIDD
KNGTVMLQNTVARKFTYALKSYADFKATILESQLSGLLLKVNDNEVWVKLIGTFNAYNVL
AIYGTAVELGMDSLEALRLLSDLESVSGRFQYIVTDSKITAIVDYAHTPDALENVLKTVD
DIRTKNEQLITVVGCGGNRDKTKRPIMAKIATDLSDKAILTSDNPRNEDPEVILDEMEQG
VEAHNYKKILRITDRKQAIKTACQLAQPNDIILIAGKGHETYQEINGVRHHFDDMETVKE
ILDQLGK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatactaaaagacatattatacaaagtagctatcgaatctgttgcaggttcgaca
gaagtcggcatccagaaaattgaatttgattcccgaaaagtagagtcaaatgatattttt
gtggccattcgcggttccttatctgacggacacgattatatcgaaaaagcggttcagtta
ggtgcaaaagctattatttgtgatacacttcctcaaaatattgagaaagaagtaacctat
attcaggtaaaagataccaatacagcattggcttttattgcggctaattattttgaagat
ccatcttcaaaactaaaattagttggcgtaaccgggacaaacggaaaaacaacaattgca
tcgttattatttcaattgtttcaaaaagcaggatttaaagttggtttattatcaaccgta
aaaatcatggttgacgatacggaatatccggcaacgcatacaacaccagattcaattaca
atcaataattatttaaatgaaatgatcgaagctggagttacgcattgttttatggaagta
agttcacacggaatccatcaaaaacgtacagaggctttgcattttgtaggcggaattttc
acgaatctttcgcacgatcatttagattatcacgtaacatttgctgaatacagagatgta
aaaaaatcattttttgattcactgccaaaaacagctttcgcattatcaaacatcgatgat
aaaaacggaactgtaatgctgcaaaatacggttgcaagaaaatttacatatgccttaaaa
tcgtatgctgattttaaagcaacaattttagaaagccagttatctggtttattgttaaaa
gtaaacgacaatgaagtttgggtaaaactaattggaacttttaatgcatacaatgttttg
gctatttacggaactgcagttgaattaggaatggatagtttggaagcattgcgcttactg
tctgatttagaaagtgtttcaggtcgttttcaatacattgttaccgattcaaaaataaca
gcaattgtagattacgcacacacgccggatgctttagaaaatgtgctgaaaacggttgat
gatatccgtacaaaaaacgaacaattgattacagttgtaggctgcggcggaaacagagat
aaaacaaaaagaccaattatggcaaaaattgcgacagatcttagtgataaagcaatttta
acatcagacaatccaagaaacgaagatcctgaagtgattctcgatgaaatggaacaaggt
gtagaagctcataattataaaaagatattgagaattacggatagaaaacaagctattaaa
accgcttgtcaattggcacagccaaatgatattattctgattgccggaaaagggcatgaa
acctatcaggaaataaatggtgttcgccatcattttgacgatatggaaactgtaaaagaa
attttagaccaactaggaaaataa
DBGET
integrated database retrieval system
