Flavobacterium panici: NLJ00_17640
Help
Entry
NLJ00_17640 CDS
T08520
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_17640
01503 Cationic antimicrobial peptide (CAMP) resistance
NLJ00_17640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_17640
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_17640
Transporters [BR:
fpb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLJ00_17640
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLJ00_17640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UUF13084
LinkDB
All DBs
Position
4200640..4203690
Genome browser
AA seq
1016 aa
AA seq
DB search
MKITNFAVKNYQFTLIIFLLVAVVGYLTLFTMPRAEDPSTHPPQYLITVIYPGTSPKDME
EQVVKPIENKIYGLENIEKILTTVEDGVAAFQVKFKYGVDVDNKYQEISTEMNALKNSEL
PKDIYQIKTEKIASSDVKILQLALVSENASDKKLRDEADKLKSKIEKITNLKDVKYAGIP
EQEIRIDLQLEKLAQLKIPLNVVMGSLQSEAADIPGGSIDLGSKVFNVKTSGKFKNADDV
SNTVIYNANGKIIYMKDVAEVGYKSQVVDHITRINGHRCVLVTAGMKDNVNITDVQKEFL
PIVDEFSKELPSNIKLVKNFDQANMVSQRLGHLGFDFTLAIVLVIVTLLPLGLRASGIVM
ISIPLSLALGLIAMNAFGFSLNQLSIVGLVVALGLLVDDSIVVVENIERWLREGHSKMDA
VLKGTKQIGIAVVGCTATLVIAFLPLAFLPDVSGEFIRSLPMAVITSVLASMIVALTLVP
FLGSRFLKTHDHAGGNIFLQYLQKFLTRAYRDIMPKALKYPRTTIAISIVLSITAFGLFK
VTGFKLFPTSEKPMFLINIKMPLQANISESDRVTKIVEAELKNHKEIVYYTSNVGKGNPQ
IYYNVHPQDRKPDFAQIFVQLEDEAKPSEKTALIEELRNKFKTMPYAKVEVKDFEQGTPL
EANIVVRLFGEDQEVLRKLSSQVETILRKQEGTVYINNELNTYKTDVKVKINKEKARTLG
VLTSDVDKVIRLSVAGLTVGDYIDDREDARNVTLTLPRDKFSNLDALKNLYVNNLQGTPI
ALNQIAEISFETSPTAINHFNKSRFSKVTALSAKGYYANDLLTHIVPKLDQLKMPKGYYY
KLSGEKESEGDALGGNFLAVIILSTFLFVAVLLLQFKTFKGIIIVLSIIPLGILGGVLLL
LLNGSPMSLVAIIGFIGLSGIQVKNSLLLVDFTNQLRQEGYSIDEAIAIAGETRFLPVVL
TSITAICGLIPIALNSNPLIAPLAIVLIGGLISSTILSRIVTPVMYKLIPPSIEKM
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacaaactttgctgttaaaaattatcagtttacactgattatctttctgctg
gttgctgtggtagggtatcttacgttgtttaccatgcccagggcggaagatccttcaaca
catccgccgcaatatttaattacggtaatctatcccgggacaagtccaaaagatatggag
gagcaggttgtaaaaccaatcgagaataaaatttacggactcgaaaacatcgaaaaaata
ttaaccacagtagaagacggtgttgcagcttttcaggtaaaatttaaatacggagtagat
gttgacaataaatatcaggagatttctacggaaatgaatgcccttaaaaacagcgagctt
ccaaaagatatttatcagataaagaccgaaaaaattgcttcttctgatgtgaaaatcctt
caattagcgttggtttcagaaaatgcatctgataaaaaacttcgtgatgaagcagataaa
cttaaatctaaaattgaaaaaatcaccaatctgaaagatgtaaagtatgcgggaattcca
gagcaggaaattcgtatcgatttacagcttgaaaaactggcacaattaaaaattccgtta
aacgtggtcatgggaagcctgcagagcgaagcagcggatattccgggaggaagtattgat
ttaggcagcaaggtatttaatgtaaaaaccagcggtaaatttaaaaatgcggatgacgta
tccaatacagtaatttacaatgctaacggtaaaataatctatatgaaagatgtagccgaa
gtaggctataagtcgcaagttgtcgatcatattacccgcatcaacggacaccgatgtgta
ctggttacagctggtatgaaagacaatgtaaacattacagatgtgcagaaagaattcctg
ccaattgtagatgaattttctaaagaattaccctcaaacatcaaattagtaaaaaacttc
gatcaggcgaatatggtatcgcagcgtttgggacatttaggttttgattttacgctggca
attgttttggtaattgtgacattacttccattaggtttaagagcttcgggaattgtgatg
atttccattccgttatccctcgcattgggattaattgcaatgaatgcttttggcttttct
ttaaatcagttgagtattgttggtcttgtggtagctttaggattgttggtggatgacagt
attgtggtagtcgaaaacatagagcgatggctgcgggaaggacattctaaaatggatgca
gtccttaaaggtaccaaacaaatcggaattgccgttgtaggctgtactgcaacacttgta
attgcatttttaccgctggctttcctgccggatgtttcgggagaatttatcagaagtctt
ccaatggcagttattaccagtgtactggcatcgatgattgtagctttaacattggtgccg
tttttaggaagccgatttttaaaaacgcacgatcatgcgggaggaaatatttttcttcaa
tatctgcaaaaattcctgaccagagcgtatcgtgatattatgcccaaagcattaaaatat
cctagaacaactattgctatttctatagttttaagcatcactgcttttggattgtttaaa
gtaacaggttttaaattatttccaacttcagaaaaaccgatgtttcttatcaatataaaa
atgccccttcaggccaatatttcagaaagtgaccgtgtgaccaaaattgtagaagcagag
cttaaaaatcataaggaaattgtgtattacacttcgaacgttggtaaaggaaatccgcag
atttattacaatgtgcatccccaggacagaaaacccgattttgcgcagatttttgtccag
ctcgaagatgaagctaaaccatcagagaaaacagccttgattgaagaacttcgaaataaa
tttaaaacaatgccttacgcaaaagtggaggtcaaagattttgaacagggaacaccatta
gaagctaatattgtcgtaagattatttggtgaagatcaggaagtgttacgcaagctttcc
tcacaggtagaaactattctgagaaagcaggaaggaactgtttatatcaacaatgaactg
aatacgtataaaactgatgttaaagttaaaatcaataaagaaaaagccagaacattgggc
gtattgaccagcgatgtagataaggtaatccgtctttcggtagcaggattaacagtcggt
gattatatagatgatagggaagatgccagaaatgttacgctgacattgccccgagataaa
ttttcgaaccttgacgctttgaaaaacttgtacgtaaataatcttcagggaactccgatt
gccctaaaccagattgctgaaatttcgtttgaaacttctccaacggcgattaaccatttt
aataaatcacgcttttcaaaagtaaccgctttatcggcaaaagggtattatgccaatgat
ttattgacacacatagttccaaaactggatcaattgaaaatgccaaaaggatattactat
aaattatcaggtgaaaaagaatccgaaggcgatgcgctgggcggtaattttttggccgta
attattttgagtacctttttgtttgtggcggttttactgctgcagtttaaaacttttaaa
ggaattattattgtattatctattattccgctgggaattttgggtggtgtgttattattg
cttctcaatggaagtccgatgtctttagttgctataatcggttttatcggtctttcggga
attcaggtaaagaactctttgctgctggtagattttaccaatcagctaagacaggaagga
tattcaattgatgaagctattgcaattgcaggagaaacgcgttttctgcctgtagtgctg
acttcaattactgcaatctgcggtttgattccgattgcattaaactcaaatcctttgatt
gcaccattggcaattgtgttaattggcggtttaatcagttctacaatattatcacgaatt
gtaacgcccgtgatgtataaattgattcctcctagtattgaaaagatgtaa
DBGET
integrated database retrieval system
