Flavobacterium psychrophilum CSF259-93: FPSM_00952 Help Entry FPSM_00952        CDS       T03254                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fpc  Flavobacterium psychrophilum CSF259-93 Pathway fpc03030   DNA replication fpc03410   Base excision repair fpc03420   Nucleotide excision repair fpc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fpc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FPSM_00952    03410 Base excision repair     FPSM_00952    03420 Nucleotide excision repair     FPSM_00952    03430 Mismatch repair     FPSM_00952  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fpc03032]     FPSM_00952    03400 DNA repair and recombination proteins [BR:fpc03400]     FPSM_00952 Enzymes [BR:fpc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FPSM_00952 DNA replication proteins [BR:fpc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FPSM_00952 DNA repair and recombination proteins [BR:fpc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FPSM_00952    NER (nucleotide excision repair)     GGR (global genome repair) factors      FPSM_00952    MMR (mismatch excision repair)     DNA ligase      FPSM_00952   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FPSM_00952 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD BRCT_2 PTCB-BRCT EcoRI RNA_ligase zf-C4_Topoisom GspL_C Motif Other DBs NCBI-ProteinID:  AIJ37447 UniProt:  A0A076P2F6 LinkDB All DBs Position 1068281..1070281 Genome browser AA seq 666 aa AA seqDB search MTVLQKIQSLREELNLHNYNYYVLDNPTISDYDFDVKLTDLQSLEKNNPEYFDENSPTQR VGGTITKNFETLKHDYRMYSLDNSYSKEDLLDWENRIQKALGDVPLEYICELKYDGASIS ITYENGRLVRAVTRGDGFQGDDVTNNIKTIKAVPIKLKGDFPEKFDIRGEIILPFAGFEK MNQDLIEIGETPYSNPRNTASGSLKLQDSAEVAKRPLDCLLYSLIGNNLPFQSHFEGLEK ARLWGFKVPKQSHLAKNMNEVFDFINIWDKNRHTLPYETDGVVIKVNDLHLQDELGYTAK SPRWAIAYKFKSEQVFTQLNSISYQVGRTGSITPVANLEPVQLAGTIVKRASLHNADQIE KLDIRINDTVFVEKGGEIIPKIIGVDLQKRPSNSQKTAYITHCPECQTKLERKEGEANHY CPNFYGCRPQIIGRIQHYISRKAMDIEGLGGETVALLYDNGLVKNYADLYDLSVEQILPL ERMAQKSAENLVQGVQNSKNIPFENVLFALGIRYVGETVAKKLAKHYKNIDAIANANLLE LVMVDEIGDKIAQSVVEFFDNQENISVLERLKNNGIQLAISEENNTVVSNKLLGKIFVVS GVFEIYSRDELKKAIEDNGGKVGSSISAKTNYVIAGQNMGPAKLEKANQLKVSIISESDF SALLTS NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atgaccgttttacaaaaaatacaatcattgcgtgaggagcttaatctccacaattataat tattacgttttagataatcctacgatttcagattatgattttgatgtaaaactaactgat cttcagtctttagaaaaaaataacccagaatatttcgacgaaaattcacccacacaacga gttggtggtacaattacaaaaaacttcgaaaccctaaaacacgattacagaatgtattcg ttagacaattcttattcgaaagaagatttgttagattgggaaaataggattcaaaaagca cttggcgatgtaccgttagaatatatttgtgagctaaaatacgatggcgcctctatttct attacttacgaaaacggtcgattggttcgagcggtaactcgtggcgatggttttcagggt gatgatgtgaccaataatattaaaactataaaagcagttccaataaaactgaaaggcgat tttcctgaaaaatttgacattcgtggagaaattattttgccctttgctggtttcgaaaaa atgaatcaagatttgatagaaattggggaaactccttattctaacccaagaaatacagct tcgggaagtttaaaattgcaggatagtgccgaagtggcaaaacgtcccttagattgtttg ctgtattcattaatcggaaataatttgccatttcaatctcattttgagggattagaaaaa gctagactttggggattcaaagttccaaaacaaagtcatttggctaaaaacatgaatgaa gttttcgatttcataaatatttgggataaaaataggcatactttaccttacgaaacagat ggggtagtcataaaagtaaatgatttgcacttgcaagatgagttaggttataccgcaaaa tcaccacgttgggcaatagcatataagtttaaatcggaacaagtttttacacaattaaat tcaatttcatatcaagttgggagaacaggatctatcacaccagtggcaaatctagaacct gtacagttagcaggaacgattgtaaaacgtgcttctttgcacaatgcagaccagatagaa aaattagatattagaataaatgataccgtttttgtagaaaaaggaggcgaaattatccct aaaattattggtgtcgatttacaaaaaaggccttcaaattcccaaaagacggcttatatt acacattgtccagaatgtcaaactaaattagaaagaaaagaaggagaagccaatcattat tgtcctaatttttatggttgtcggccacaaattataggtagaatacagcattatatttcc agaaaagccatggatattgaaggtttgggaggagaaacggttgctttattatatgataat ggattggtaaaaaactatgccgatttgtatgatttatcagtagaacaaattttgccattg gaaagaatggcacaaaaaagtgccgaaaatttagtacaaggtgttcagaattctaaaaat attcctttcgaaaatgttttgtttgcactcgggattcgctatgtaggggaaacggttgct aaaaagttagccaaacattacaaaaatattgatgctattgctaatgctaatttactcgaa ttggtcatggtagatgaaattggagataaaattgcacaaagtgtagtcgaatttttcgat aatcaggaaaatataagtgttctagagaggttaaaaaataacggaattcagttagcaatc tctgaagaaaataatacagttgtttcgaataagcttcttggtaaaatatttgttgtttcg ggagtttttgagatttattctcgtgacgagttaaaaaaagcaatcgaggataatggtggt aaagtggggagttctatttctgcaaagacaaattatgtaattgcagggcaaaacatgggg ccagcaaaattagaaaaagcaaaccaactaaaagtatcaattattagtgaaagtgatttt agtgctttattaacttcgtaa

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