Fluviibacter phosphoraccumulans: SHINM1_008220
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Entry
SHINM1_008220 CDS
T07031
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHINM1_008220 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_008220 (nth)
Enzymes [BR:
fpho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SHINM1_008220 (nth)
DNA repair and recombination proteins [BR:
fpho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHINM1_008220 (nth)
Prokaryotic type
SHINM1_008220 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BCA65220
LinkDB
All DBs
Position
complement(817701..818360)
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AA seq
219 aa
AA seq
DB search
MKAGDRVEFFRRLQAANPHPTTELAYGSTFQLLIAVILSAQATDKGVNLATRHLFIDAPD
AAKMGALDVEGLVPYIKTIGLYPTKAKNVIATCKILCERYGGEVPEDRAALEALPGVGRK
TANVVLNTAFGHPTMAVDTHIFRVANRTGLAPGKTPLAVELKLLKNIPKEYLHDAHHWLI
LLGRYICKARKPECEVCPVLDLCRAPEAKAARKLINPHQ
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccggtgatcgcgtcgaattttttcgacgcctccaagccgctaacccgcatccc
acgaccgagctggcttacggttccacctttcagctgctgattgccgttattctgtcggcc
caggccactgacaaaggggtcaatctggcgacacgccatctgtttattgatgcgcctgat
gcggccaagatgggcgccctggatgttgaagggctcgtaccctatatcaaaaccatcggc
ctctacccgaccaaagccaaaaacgttattgccacctgcaagatactctgcgaacgctat
gggggtgaggtaccggaagatcgtgcagcactagaagccctgcccggcgtcggccgcaaa
accgccaacgttgtgctcaacaccgccttcggtcacccgactatggcggtagatactcac
atctttcgtgttgccaatcgcaccggcttggctcccggcaaaacgccgttagctgtggaa
ttgaagctgttaaaaaacattccgaaagagtatctacacgatgcccaccactggctgatt
ctgctgggccgctatatctgtaaggcacgcaaaccggaatgcgaagtctgtccggtgctc
gacctttgccgtgcccccgaagccaaagccgcccgcaagctgattaaccctcaccaatga
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