Flavobacterium psychrophilum v4-33: IA06_08940 Help Entry IA06_08940        CDS       T03661                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fpk  Flavobacterium psychrophilum v4-33 Pathway fpk03030   DNA replication fpk03410   Base excision repair fpk03420   Nucleotide excision repair fpk03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fpk00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     IA06_08940    03410 Base excision repair     IA06_08940    03420 Nucleotide excision repair     IA06_08940    03430 Mismatch repair     IA06_08940  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fpk03032]     IA06_08940    03400 DNA repair and recombination proteins [BR:fpk03400]     IA06_08940 Enzymes [BR:fpk01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      IA06_08940 DNA replication proteins [BR:fpk03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      IA06_08940 DNA repair and recombination proteins [BR:fpk03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      IA06_08940    NER (nucleotide excision repair)     GGR (global genome repair) factors      IA06_08940    MMR (mismatch excision repair)     DNA ligase      IA06_08940   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       IA06_08940 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD BRCT_2 PTCB-BRCT EcoRI RNA_ligase zf-C4_Topoisom GspL_C Motif Other DBs NCBI-ProteinID:  AIG41921 UniProt:  A0A076P2F6 LinkDB All DBs Position complement(1931754..1933754) Genome browser AA seq 666 aa AA seqDB search MTVLQKIQSLREELNLHNYNYYVLDNPTISDYDFDVKLTDLQSLEKNNPEYFDENSPTQR VGGTITKNFETLKHDYRMYSLDNSYSKEDLLDWENRIQKALGDVPLEYICELKYDGASIS ITYENGRLVRAVTRGDGFQGDDVTNNIKTIKAVPIKLKGDFPEKFDIRGEIILPFAGFEK MNQDLIEIGETPYSNPRNTASGSLKLQDSAEVAKRPLDCLLYSLIGNNLPFQSHFEGLEK ARLWGFKVPKQSHLAKNMNEVFDFINIWDKNRHTLPYETDGVVIKVNDLHLQDELGYTAK SPRWAIAYKFKSEQVFTQLNSISYQVGRTGSITPVANLEPVQLAGTIVKRASLHNADQIE KLDIRINDTVFVEKGGEIIPKIIGVDLQKRPSNSQKTAYITHCPECQTKLERKEGEANHY CPNFYGCRPQIIGRIQHYISRKAMDIEGLGGETVALLYDNGLVKNYADLYDLSVEQILPL ERMAQKSAENLVQGVQNSKNIPFENVLFALGIRYVGETVAKKLAKHYKNIDAIANANLLE LVMVDEIGDKIAQSVVEFFDNQENISVLERLKNNGIQLAISEENNTVVSNKLLGKIFVVS GVFEIYSRDELKKAIEDNGGKVGSSISAKTNYVIAGQNMGPAKLEKANQLKVSIISESDF SALLTS NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atgaccgttttacaaaaaatacaatcattgcgtgaggagcttaatctccacaattataat tattacgttttagataatcctacgatttcagattatgattttgatgtaaaactaactgat cttcagtctttagaaaaaaataacccagaatatttcgacgaaaattcacccacacaacga gttggtggtacaattacaaaaaacttcgaaaccctaaaacacgattacagaatgtattcg ttagacaattcttattcgaaagaagatttgttagattgggaaaataggattcaaaaagca cttggcgatgtaccgttagaatatatttgtgagctaaaatacgatggcgcctctatttct attacttacgaaaacggtcgattggttcgagcggtaactcgtggcgatggttttcagggt gatgatgtgaccaataatattaaaactataaaagcagttccaataaaactgaaaggcgat tttcctgaaaaatttgacattcgtggagaaattattttgccctttgctggtttcgaaaaa atgaatcaagatttgatagaaattggggaaactccttattctaacccaagaaatacagct tcgggaagtttaaaattgcaggatagtgccgaagtggcaaaacgtcccttagattgtttg ctgtattcattaatcggaaataatttgccatttcaatctcattttgagggattagaaaaa gctagactttggggattcaaagttccaaaacaaagtcatttggctaaaaacatgaatgaa gttttcgatttcataaatatttgggataaaaataggcatactttaccttacgaaacagat ggggtagtcataaaagtaaatgatttgcacttgcaagatgagttaggttataccgcaaaa tcaccacgttgggcaatagcatataagtttaaatcggaacaagtttttacacaattaaat tcaatttcatatcaagttgggagaacaggatctatcacaccagtggcaaatctagaacct gtacagttagcaggaacgattgtaaaacgtgcttctttgcacaatgcagaccagatagaa aaattagatattagaataaatgataccgtttttgtagaaaaaggaggcgaaattatccct aaaattattggtgtcgatttacaaaaaaggccttcaaattcccaaaagacggcttatatt acacattgtccagaatgtcaaactaaattagaaagaaaagaaggagaagccaatcattat tgtcctaatttttatggttgtcggccacaaattataggtagaatacagcattatatttcc agaaaagccatggatattgaaggtttgggaggagaaacggttgctttattatatgataat ggattggtaaaaaactatgccgatttgtatgatttatcagtagaacaaattttgccattg gaaagaatggcacaaaaaagtgccgaaaatttagtacaaggtgttcagaattctaaaaat attcctttcgaaaatgttttgtttgcactcgggattcgctatgtaggggaaacggttgct aaaaagttagccaaacattacaaaaatattgatgctattgctaatgctaatttactcgaa ttggtcatggtagatgaaattggagataaaattgcacaaagtgtagtcgaatttttcgat aatcaggaaaatataagtgttctagagaggttaaaaaataacggaattcagttagcaatc tctgaagaaaataatacagttgtttcgaataagcttcttggtaaaatatttgttgtttcg ggagtttttgagatttattctcgtgacgagttaaaaaaagcaatcgaggataatggtggt aaagtggggagttctatttctgcaaagacaaattatgtaattgcagggcaaaacatgggg ccagcaaaattagaaaaagcaaaccaactaaaagtatcaattattagtgaaagtgatttt agtgctttattaacttcgtaa

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