Flavonifractor plautii: A4U99_09405 Help Entry A4U99_09405       CDS       T04429                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fpla  Flavonifractor plautii Pathway fpla03030   DNA replication fpla03410   Base excision repair fpla03420   Nucleotide excision repair fpla03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fpla00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     A4U99_09405    03410 Base excision repair     A4U99_09405    03420 Nucleotide excision repair     A4U99_09405    03430 Mismatch repair     A4U99_09405  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fpla03032]     A4U99_09405    03400 DNA repair and recombination proteins [BR:fpla03400]     A4U99_09405 Enzymes [BR:fpla01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      A4U99_09405 DNA replication proteins [BR:fpla03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      A4U99_09405 DNA repair and recombination proteins [BR:fpla03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      A4U99_09405    NER (nucleotide excision repair)     GGR (global genome repair) factors      A4U99_09405    MMR (mismatch excision repair)     DNA ligase      A4U99_09405   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       A4U99_09405 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH Nlig-Ia BRCT_2 RUBY_RBDX Zn_ribbon_NUD DUF4796_N Motif Other DBs NCBI-ProteinID:  ANU41278 UniProt:  A0AAX1KJ26 LinkDB All DBs Position complement(1948155..1950155) Genome browser AA seq 666 aa AA seqDB search MDEKQEIQSLRRELEQANYEYYVLDNPSMSDYDFDHKLRRLEELEAAHPELVTPDSPTQR VGGKVADGFQEVRHRIPLESLQDVFSVEELEEFDQRMQEALPEGVEYDVEPKVDGLSVAL EYENGLFVRGATRGDGQVGEDVTENLRTIPSIPLRLPEALPALIVRGEVFMPKKSFERLN EERELRGESLFANPRNAAAGSLRQLDPKIAASRGLDIRVFNIQWAEGKTFQTHSETLEYL RKQHFKVIPHDTCKTIAEAAERIQAMGEGREAYPFDIDGAVVKVNSLAERETLGSTAKFP RWAAAYKYPPEQKPSRVVDIVVQVGRTGVLTPKAVVEPVRLAGTTVTSATLHNQDFIAEK DIRIGDTVLVQKAGEIIPEIVEVLKEKRPEGTQPYHLPEQCPVCGAPVARDEDGAHIRCT GAECPAQRLRHLVHFASRDAMDIEGLGPAVVENLVGAGLVKGPGDLYHLNAEEVAQLERM GKKSAENLVAAIERSKGNDLSRLLFAFGIRQVGQKAGKVLAARFGTLDALMAASEEELTA VPDIGGITARSLLQWFQSPQSIHLIDTLREAGVNLESHEEPVGDQLAGKIFVLTGTLERF TRDEAGAMIEAQGGKVSGSVSKKTSYVVAGEAAGSKLRKAQELGIPVLTEEEFLTMLGSR PDTDQL NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atggacgagaaacaggagatacagagcctgcgccgggagctggagcaggcgaactatgaa tactatgtgctggacaaccccagcatgtccgactacgattttgaccacaaactccgccgc ctggaggagctggaggcggcccacccggagctggttacccccgattctcccactcagcgg gtggggggcaaggtggccgacggcttccaggaggtgcgccaccggataccgctggagagc cttcaggacgtgttctccgtggaggagctggaggagttcgatcagcggatgcaggaggcc ctgccggagggcgttgaatacgacgtggagcccaaggtggacggcctgtctgtggcgctg gagtatgaaaacggcctctttgtgcgcggcgccacccgcggcgatggccaggtgggagag gatgtgacagagaatctgaggaccatcccttccatccctctgcgcctgccggaggccctg cccgccctgattgtgcggggcgaggtgtttatgcccaaaaagagctttgaacggctcaac gaggagcgggaactgagaggggagagcctgttcgccaatcctcggaatgccgcggccggc tccctgcggcagctagaccctaaaatcgcggcctcccgagggctggatatccgggttttt aacatccagtgggcagagggaaaaacctttcagacccattcagaaaccctggaatacctg cggaaacagcactttaaagtaattccacatgacacctgtaaaacgattgccgaggcggcg gagcgtatccaggccatgggggagggcagagaggcttacccctttgacattgatggtgcg gttgtaaaggtaaatagccttgcagaacgtgaaaccttgggcagcacggcgaaatttccc cgctgggcggcggcctacaaatatccgccggagcagaagccgtcccgggtggtggacatt gtggttcaggtggggcgtaccggcgtgctgacgccgaaggccgtagtggagccagtgcgt ctggccggcaccaccgtcacaagcgccacccttcacaatcaggatttcatcgcggaaaag gacatccgcatcggagatactgtgctggtacagaaggcgggagagatcattccggagatt gtggaggtgctgaaggagaagcgcccggagggaacgcagccctaccacctgccggagcag tgcccggtgtgcggcgcgccggtggcccgcgacgaggatggggcccacatccgctgcacc ggcgcagagtgccctgcccagcgcctgcgccatttggtccacttcgccagtcgggacgcc atggacatcgagggcctgggccccgcggtggtggagaatctggtgggcgccggtctggtc aaggggccgggtgacctgtaccacctcaatgcggaggaggtggcccagttagagcgcatg ggcaaaaagagcgcggaaaacctcgttgcagccattgaacggtccaagggcaatgacctg tcccggctgctgtttgccttcggcatccgccaggtggggcagaaggcggggaaggtgctg gccgcccgctttggcacactggatgcgctgatggcggcctcggaagaggagctgaccgcg gtacccgacatcggcggaatcacggcccggagcctgctccagtggttccagagcccccag agcattcacctcattgacacgctgcgggaagcaggggtgaatctggaaagccatgaggag ccggtgggcgaccaactggcggggaagatctttgtgttgacaggtacgctggagcgattt acccgggacgaggccggagcgatgatcgaggctcagggcggcaaagtgtccggatctgtt tccaagaagacctcctatgtggtggccggagaggcggcgggctccaagctgcgcaaggcc caggagctgggcatcccggtgcttaccgaggaggaatttcttaccatgctcggcagcagg cccgatacggatcaattataa

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