Fusarium poae: FPOAC1_002874
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Entry
FPOAC1_002874 CDS
T09519
Symbol
LSM3
Name
(RefSeq) U4/U6-U5 snRNP complex subunit lsm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
fpoa
Fusarium poae
Pathway
fpoa03018
RNA degradation
fpoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPOAC1_002874 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
FPOAC1_002874 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpoa03019
]
FPOAC1_002874 (LSM3)
03041 Spliceosome [BR:
fpoa03041
]
FPOAC1_002874 (LSM3)
Messenger RNA biogenesis [BR:
fpoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPOAC1_002874 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
FPOAC1_002874 (LSM3)
Spliceosome [BR:
fpoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FPOAC1_002874 (LSM3)
Complex C
U2 snRNP components
FPOAC1_002874 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
68337877
NCBI-ProteinID:
XP_044713364
UniProt:
A0A1B8B7T6
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All DBs
Position
1:8798847..8799288
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AA seq
96 aa
AA seq
DB search
MADTGEEPHHVSEPLDLVRLLLNEVVFVKLRGDRELKGKLHAYDSHCNLVLGEVEETIYT
VDEDEDDDELKTISRKSEMLFVRGDSVVLISPGVPF
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactggagaagaaccccatcatgtgtcggagcctctcgaccttgtccgactt
cttctcaacgaggtcgtctttgtcaaacttcgaggagaccgagaactcaagggaaagcta
catgcttatgacagccattgcaatctggtactaggagaggttgaggagactatctacact
gtcgatgaggatgaggatgatgatgagctcaagaccatcagccggaaatctgagatgctg
tttgtgagaggtgacagtgttgtcttgatctcacctggagttcccttttag
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