Flavobacterium psychrophilum JIP02/86: FP2200
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Entry
FP2200 CDS
T00548
Symbol
ygcF
Name
(GenBank) Protein of unknown function YgcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps00790
Folate biosynthesis
fps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
FP2200 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fps03016
]
FP2200 (ygcF)
Enzymes [BR:
fps01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
FP2200 (ygcF)
Transfer RNA biogenesis [BR:
fps03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FP2200 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF2237
Motif
Other DBs
NCBI-ProteinID:
CAL44256
UniProt:
A6H1N2
LinkDB
All DBs
Position
complement(2518808..2519440)
Genome browser
AA seq
210 aa
AA seq
DB search
MLTKEIQIAVEKGEMLPLMEEFYTIQGEGYHTGTAAYFIRIGGCDVGCHWCDVKESWNAA
LHPPTKTDVIVENATKYAKTIVVTGGEPLTWDMTVLTQRLKAENLQVHIETSGAYPVTGA
WDWFCLSPKKNKLPVAEAYEIAHELKVIIYNKHDFIFAEEQAAKVNKNAILFLQSEWSKK
EEMTPFIVDYVMNNPKWRVSLQTHKYLNIP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaaagaaatacaaattgcagtcgaaaaaggagagatgcttccacttatggaa
gagttttacaccatacaaggagaaggatatcacacaggaacagcagcttattttatacga
ataggcggttgcgatgtgggctgtcattggtgcgacgtaaaagaaagttggaacgcagca
ctgcatccgccaacaaaaacagatgtcattgttgaaaacgcaacaaaatacgcaaaaaca
atagttgtaactggaggagagccacttacctgggacatgacggttttaacccaaagatta
aaagcagaaaaccttcaagtgcatattgaaacctctggagcctatccagtaacaggtgct
tgggattggttttgcctttcaccaaaaaaaaataaactcccagttgcagaagcatacgaa
attgctcatgaactaaaagtaattatttacaacaaacacgattttatttttgccgaagaa
caagccgccaaagttaataaaaacgccatacttttccttcagtcagaatggagtaagaaa
gaagaaatgacaccatttattgtagattatgtgatgaataatccgaaatggagagtgtca
ttgcaaacacataaatatctgaatataccctaa
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