Flavobacterium psychrophilum Z2: AMR72_12830
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Entry
AMR72_12830 CDS
T04556
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Pathway
fpsz00300
Lysine biosynthesis
fpsz00550
Peptidoglycan biosynthesis
fpsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMR72_12830
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMR72_12830
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
AMR72_12830
Enzymes [BR:
fpsz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AMR72_12830
Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
Precursor biosynthesis
Amino acid ligase
AMR72_12830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_15
YqeC
CbiA
DUF3440
Glyco_hydro_59M
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
ALM49710
LinkDB
All DBs
Position
2932930..2934393
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AA seq
487 aa
AA seq
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MVILRDILYRASIEAVKGATDIDVNKIEFDSRLVKEGDVFVAIRGTISDGHSFIDKAVSL
GAAAIVCEEMPEETVEGITYIQAKSASAALAHMAANYYGNPSHNVKLVGITGTNGKTTIA
SLLYQLFKNAGYKTGLLSTVKIMVDNTEYKATHTTPDSLTINKYLKEMEEVGCEYCFMEV
SSHGIHQNRTAGLEFAGGVFTNLSHDHLDYHSSFAEYRDVKKRFFDELPKGSFGLVNVDD
KNGLIMLQNTKAKKLTYALKTYADYKANILENQLSGLLLKINEQEVWVKLIGTFNAYNLL
AIYATAVNLGLENVEVLRLMSELESVSGRFQFIVSESKVTAIVDYAHTPDALENVLSTIE
NIRTRNEQLITVVGCGGDRDKTKRPIMAHIASNMSDKAIFTSDNPRSEVPEDIIEDMEKG
VEPQNYKKTIAVVDRKQAIKIACQLARPNDIILIAGKGHETYQEIKGERFHFDDMETVKE
ILEQLNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atagtgattttaagggatattttatacagggcatctattgaggcggtgaaaggcgccaca
gatattgatgtgaacaaaattgagtttgattcgcgcctggttaaagaaggtgacgtgttt
gtggctatccgcggtacgattagcgatggacacagctttattgataaggccgtaagcctt
ggcgcagcagcaattgtttgcgaagaaatgcccgaagaaactgttgaaggcatcacttat
attcaggctaaaagtgcaagtgcggcattagcacacatggcggctaactattacggtaac
ccgtcgcacaatgtaaagcttgtaggtataactggtactaacggtaaaactactatagca
tcattgctatatcagttgtttaaaaatgcaggatacaaaacagggctgttaagcactgta
aaaataatggtagacaatacggagtataaagctacgcatacaacgcccgattcgcttact
ataaataagtatttaaaagagatggaagaagtgggttgtgagtattgcttcatggaagta
agctctcacggtatccaccagaacaggacagcaggccttgagtttgcgggtggtgtattt
accaatctgtctcatgatcacctggattatcacagctcttttgcggaatacagggatgta
aagaaaaggttctttgacgaattgccaaaaggttctttcggacttgttaatgttgacgac
aagaacggacttataatgcttcagaatacaaaagctaaaaagcttacgtatgcactgaaa
acgtatgccgactataaagcaaatatactggaaaaccagttgtcgggactactgcttaaa
ataaacgagcaggaagtatgggttaagcttataggaactttcaatgcgtataacctgctt
gctatttatgctacggcggttaacctgggccttgaaaatgtagaggtattgcgacttatg
agtgagttggaaagtgtttcaggaaggtttcagtttatagtgtctgaaagtaaggtaact
gctattgtagattatgcacatacacccgatgcattagagaatgtgcttagcactattgaa
aatattcgcacgcgtaacgaacagcttattacggttgtaggttgtggtggcgacagggat
aaaacaaaacgcccgattatggcgcacatcgcatcaaacatgagtgataaagccattttt
acttcagacaatccgcgtagcgaagtgcctgaagatattattgaagacatggaaaaaggc
gtagagcctcagaattataaaaaaacaattgcggtggtagacagaaaacaggctataaag
attgcctgtcagcttgcaaggccaaacgacattatactcatagccggaaaagggcatgag
acctaccaggaaatcaaaggggagcgttttcactttgatgacatggaaacagtaaaagag
attttagagcaactaaacaaatag
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