KEGG   Flavobacterium psychrophilum Z2: AMR72_16510
Entry
AMR72_16510       CDS       T04556                                 
Name
(GenBank) DNA lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
fpsz  Flavobacterium psychrophilum Z2
Pathway
fpsz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fpsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMR72_16510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpsz03400]
    AMR72_16510
Enzymes [BR:fpsz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AMR72_16510
DNA repair and recombination proteins [BR:fpsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMR72_16510
 Prokaryotic type
     AMR72_16510
SSDB
Motif
Pfam: HhH-GPD Ogg-HhH HHH EndIII_4Fe-2S Ribosomal_S13
Other DBs
NCBI-ProteinID: ALM50342
LinkDB
Position
complement(3720233..3720877)
AA seq 214 aa
MDLFNEGTDWPKALKPLIAEYKGKEHPLHYKNIYQLLVMVVLAAQDSDANINKVTVDFFK
KFPDMKALSKANSAELHEYLAKVRFNGNKIAWLQEIAETVKEDKNIPKTMKELVALKGVG
RKSANVIMREAGVNAEGILVDLHVLRVAPRLGITTDGDATKIEKQLMQKLPKDMWGEVGM
ALSFLGREICRPTNPKHSECILSNVCEYCQKHKS
NT seq 645 nt   +upstreamnt  +downstreamnt
atggatctctttaacgaaggcaccgactggccaaaagctttaaaaccactgattgctgaa
tataagggcaaggagcatccattgcactacaaaaacatctaccaattactggttatggtt
gtcttggctgcacaggatagtgatgccaatataaataaagtaacggttgacttctttaaa
aaatttcctgacatgaaagctttatcgaaagccaatagtgctgaattgcatgaatacctc
gccaaagtacgtttcaacggaaataaaattgcctggcttcaggaaattgcagaaactgtt
aaagaagataagaatatccctaaaacaatgaaagagcttgttgccctcaaaggtgtaggc
agaaaatctgccaacgtcataatgcgggaagcgggcgtaaatgcagaaggcattttagta
gatcttcatgtacttcgtgttgcaccccgccttggtattactactgatggtgacgccaca
aagattgaaaaacaattgatgcaaaaacttccgaaagatatgtggggagaagttggtatg
gcactttcattccttggacgtgaaatttgcaggccaacaaacccgaaacacagcgaatgt
atacttagcaatgtttgcgaatattgccaaaaacataaatcatag

DBGET integrated database retrieval system