Fusarium pseudograminearum: FPSE_02778
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Entry
FPSE_02778 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FPSE_02778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_02778
Enzymes [BR:
fpu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FPSE_02778
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FPSE_02778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
RNA_ligase
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
20361397
NCBI-ProteinID:
XP_009254172
UniProt:
K3VQ57
LinkDB
All DBs
Position
4:complement(2154912..2159562)
Genome browser
AA seq
1001 aa
AA seq
DB search
MNSCVLDLILFGKGSANKRSSRCPDRVFISLIHHWLFFEMKKMIQDAAHLSELLLGCMGG
IALLVVELRSTFTSSSTHNSTKFRGGQTTYPSANHVILRQGRVCKEEDAADTLERIIGRA
CLLGASRIAELARYRQPGSGVDLADCVHRILTITPSPGYSQRGLVTVEEIDELLHSLASK
VRWSSPSIRASQASMTPTNRTDVELMYRRLSAVEAKWFTRLVLKSYQPLVLDPHLIYRLC
DPLLPCVLRVQDDFATAITTTQTLRRRLLPNPGQQTPREQIMGTVKPQLGIKIGRQPWIK
GRSIKHCLDMGHGSMSVEEKIDGEYCQIHIDPSKGDRCIQIFSKSGKDSTEDRVALHGTI
LESLKIGQPDARVTKGCILEGELVVYDDYQNKILPFDKIRKHVSRRGWAELVPRQVVDFG
QPLGVSTLRKTFALTILARKEGLVLKPDEPYFDFKDQRRKFSSCCIKLKKEYIGSFGDVG
DFAVVGAKYDSAKAISYRIPGLKWTHFYVGCLDNREAVRNWKVKPEFTIVNVVELNETLL
REVVTYSNPEPVAPRDNEAIILKQAPGVEQGSPPTAIFTKPLVFDLKCFSFDRVGNTGFW
SLRFPSVTKVHFDRDFTDTISFEQLQELAKDATTAATLEDSQENLQWIAKLEAADPRGIA
VDAASQLTMTTMPTPSPRKSTQNTTSTWSPTSPLTTRSPAGNIDSPCRDRVERFRPLILS
TAVATLPTPAAPLDSFTRQRAKQKRDPLIIEPAPPHKRPKLDTESLPKDKHPLDSATSFQ
PRLPLTCVNDNSQSQPVMITCASPSTSVSLDDPDSDENDAPDSILCVNPEHSSPSGNDLE
TDAELHRDIPVNTIVSTGTKGCIYAGEDCAFAKTDVLISPGLLSNPTAKTLIELHGIENP
VEHLDAWLEQEKSDKLRETGISSTMIFLLCQSDDKEATKSLFDKIQKVRESIPHRLQNWI
HVYDWRVLQHVTIQEDATIQPKYYDGFHTPWQRWRIGTGLI
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctgcgtgttagaccttatcttgtttggcaaaggttccgcgaacaagcgctcg
agccgttgtccagacagagtgtttatatctcttatccatcattggctcttttttgagatg
aagaaaatgatccaagatgcagctcatttatccgagctattattgggctgtatgggcggc
atcgctttgctggtcgtggagttgcggtcgacttttacatcgtcatccactcacaattca
acaaaattcagaggcggtcagacaacatacccgtcagccaaccacgtgattctgcgtcaa
ggtcgcgtttgcaaggaggaagatgcggcggacactctggaaagaatcatcggccgcgca
tgtcttctaggggcttcacgtatcgccgagctggctcgataccgtcaaccaggttctggt
gtcgatctagcagactgcgttcatcgcattctgactataacaccgagccccgggtacagc
cagaggggtcttgttactgtagaagaaatcgacgagctcctacactcgctcgcctcaaaa
gtgagatggagctccccctcgattcgcgcctcgcaagccagcatgactccaaccaacaga
acagatgttgagctcatgtacagaaggctgagcgcagtagaggctaagtggtttacaagg
ttggttttaaaaagttatcaaccgctggtattagacccgcatctcatatatcgactctgc
gaccctcttcttccttgcgttctcagggtccaagacgattttgctactgcgattaccact
acgcaaacgttacgaaggagattactcccaaatcctggacaacagacaccgcgtgaacaa
atcatgggtacggtgaagcctcaactgggcatcaagattggacggcagccttggatcaaa
ggccgtagtatcaagcattgtttagatatgggccacgggagtatgagtgtggaagagaag
atcgatggcgaatactgccaaatacatatagacccaagtaaaggagatcggtgcattcag
attttttccaagagcggcaaagacagcactgaagatagggttgcacttcacgggacaata
ttagaatcgctcaaaattggacagcccgacgccagagtcaccaagggctgtatattggaa
ggggagttggttgtgtatgatgattatcaaaataaaatactcccattcgataaaatcagg
aagcatgtctcacggagaggatgggcagaactagttcctcgacaagttgttgattttggc
caaccactcggcgtatcgaccctgcgcaaaacgtttgccctgaccatcttggcccgaaaa
gaaggcctcgttttgaaaccagatgagccctactttgacttcaaagatcaacggcgaaaa
ttctcgagttgctgtatcaaactcaaaaaagagtacattggaagctttggagatgttggc
gattttgcagttgtcggggccaagtacgactcggcgaaagccatctcctacagaattcca
gggttgaaatggacgcatttctatgttggctgcttggacaacagagaagcggttagaaat
tggaaggtcaagccggaattcacgatcgtcaatgtcgttgaactaaacgaaacgcttctt
agagaggttgtcacctactcaaacccagaacccgttgcgccaagagataatgaggcgatc
attctcaagcaagcccctggcgttgagcaagggtcgcctccaactgctatatttactaaa
ccactggtctttgacctcaaatgcttcagctttgatagagtgggaaacactggattttgg
agcctgcgatttccttcagtgacaaaagtacattttgatcgggatttcactgatacaata
tcctttgaacagttgcaagagctggccaaggatgcaactacagcggctacgctcgaggat
agtcaggagaacttacaatggattgccaagctagaggcagccgacccgcgtggtattgca
gttgatgctgctagtcaattgacaatgacaactatgccaacaccgtcgcctcgaaagtca
acacagaataccacctccacatggtctcccacttccccactaacaacaagatcaccagcg
ggcaatattgatagcccttgccgtgatagggtcgaaagattccgtcctttaatattatct
actgcggtagccacgttgcctacacctgctgcaccgctcgattcattcacaaggcagcgt
gcaaaacaaaaacgtgatccgctcatcatagagcctgcaccaccacacaaacgcccgaaa
ctagacactgaatcactgccgaaagataaacacccactcgacagcgcaacaagtttccaa
ccacgcctacctcttacctgtgtgaacgacaactcacaatctcagcctgtcatgattact
tgcgcatctccttccacctctgtctcccttgatgatcccgactctgatgagaatgatgct
ccggattctattctgtgcgtcaaccctgaacacagcagtccttctgggaatgatctcgag
accgacgcagaacttcaccgtgatattccagtgaataccatcgtttctactggcactaag
gggtgcatctatgcaggcgaggactgtgcatttgcaaaaacagatgtgttgatttcacct
ggacttctcagcaatccgacagctaagacactaattgagctacacggaattgaaaatcca
gtcgagcaccttgatgcttggctggaacaggagaagtcagacaaactcagagagacaggg
atcagtagcaccatgatctttcttctgtgtcaatcggacgacaaagaagcaacaaagtcc
ctttttgacaagatccagaaagtacgggaaagtatcccacacagactacagaactggatt
catgtttacgactggcgcgttctgcaacatgtgacaatccaggaggatgccactatccaa
cccaaatattacgatgggtttcataccccgtggcagcgctggcgcatcggaactggactc
atctga
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