Fusarium pseudograminearum: FPSE_03220
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Entry
FPSE_03220 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_03220
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FPSE_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_15
AAA_22
DUF3584
AAA_28
PduV-EutP
AAA
SRP54
AAA_25
AAA_16
ORC-CDC6-like
RsgA_GTPase
AAA_14
Arf
nSTAND3
AAA_13
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-GeneID:
20361839
NCBI-ProteinID:
XP_009254614
UniProt:
K3W1X7
LinkDB
All DBs
Position
4:2709823..2710686
Genome browser
AA seq
287 aa
AA seq
DB search
MTPPPKPPRVEVNNLSYTFPDYSTGVNNITLDLPPRSRTLLIGANGAGKTTLLRLLAGKR
LAPSDTISICGVDPFKEGLEGVTYLGLEWVLNPIVRTDIGVNELLSSVGGDAYPDRRDEL
VAMLDVDTNWRMHAVSDGERRRVQLAMGLLRPWTVLLLDEITVDLDVLSRAEFLAWLKNE
TEIRECTIVYATHILDNLAGWPTHLAHMHLGTVKEWDEADKMLATIDGTVGASGNSRLGE
LVLGWLRDDLKERGPRSGINRGSEGKTYGFGGIQIGGYGDESKPRKE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcctcccaagcctcctcgtgtcgaggtcaacaacctctcatacacgttccct
gactactcaactggtgtcaacaacattactctcgacctccccccgcgatcccgtactctg
ctcattggcgccaacggtgctggtaagacgactctgcttcgtctcctcgctggcaagcgc
cttgcgcccagtgacaccatctctatctgcggagttgaccctttcaaggaaggtcttgag
ggtgtcacatatctcggccttgaatgggttctcaaccctattgtccgaactgacattggc
gtcaacgagctgcttagctctgttggcggtgatgcgtaccctgaccgtcgagatgagctt
gtagccatgctcgacgtcgacactaactggcgcatgcacgctgtttccgatggtgagcgc
cgtcgcgttcagcttgcaatgggtcttctgagaccctggactgtcctgcttctcgatgag
atcactgttgatctcgatgtcctaagccgtgccgaatttctcgcctggctcaagaacgag
acagagatccgagagtgcaccatcgtttatgctacccatatcctggacaaccttgctggc
tggcctactcacctcgcgcacatgcacctcggtactgtcaaggaatgggacgaagccgac
aagatgcttgccaccatcgacggcactgtcggtgcctctggcaacagtcgtctaggagag
ctcgtcctaggctggctccgagatgacctgaaagagcgaggaccacgaagcggtatcaac
cgcggttctgaaggcaagacgtacggttttggaggaatccagattggcggctatggcgac
gagtctaagccgcgtaaggaataa
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