Flavobacterium psychrophilum V4-24: IA04_04285
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Entry
IA04_04285 CDS
T03660
Name
(GenBank) multidrug transporter AcrB
KO
K18138
multidrug efflux pump
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw01501
beta-Lactam resistance
fpw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IA04_04285
01503 Cationic antimicrobial peptide (CAMP) resistance
IA04_04285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpw02000
]
IA04_04285
01504 Antimicrobial resistance genes [BR:
fpw01504
]
IA04_04285
Transporters [BR:
fpw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IA04_04285
Antimicrobial resistance genes [BR:
fpw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IA04_04285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6133
Motif
Other DBs
NCBI-ProteinID:
AIG36542
LinkDB
All DBs
Position
945974..949141
Genome browser
AA seq
1055 aa
AA seq
DB search
MFNKFIERPVLSIVISLMIVLLGVLAMTSLPVTQLPSISPPKVNVAASYPGANNELLIKA
VVIPLERAINGVPGMKYIASDAGNDGEASIQVIFNLGTDPNQASINIQNRVASVVNKLPP
LVVREGVKITREESNNLMYINLYSKDPTMDQKFLFNFADINLISELKRVNGVGVADIVGN
REYAMRVWLKPDRMLAYKISAAEVMEALSQQSLEAAPGKTGESSGKRSQAFEYVLKYSGR
FTTQEQYGNIIIKSSPNGEILRLKDVANIEFGSSMYDIYSNLNGNPSAAITIKQSYGSNA
SQVIKDVKARLEEIKKESFPKGIDYEISYDASKFLDASIEKVLHTLIEAFILVGLVVFLF
LGNWRSTIIPAIAVPVSLVGTFAFMNFFGININLVTLFALVLAIGVVVDDAIVVIEAVHA
KMEEEHLGPLKATKKAMHEISGAIIAITFLMAAVFIPVAFMSGPVGIFYRQFSITMATGI
ILSGIVALTLTPALCAMMLKKTHGVARKKTPLNNFLDGFNHKFEQLTGKYQGVLGKIVNK
RSITFIAFIGFCTGIFFLNNSLPTGFIPNEDQGMFYAIIQTPPGSSLERTNDVALKLQKI
SEKIEGVKSVSALAGFEILTEGTGANSGTCLVNLKNWEDRKHSANEIMKELEEKSKDITG
ATLEFFQPPAVPGYGAAGGFELRLLDKAGSGNFKKMETVNNDFVKELNKRPELSSVFSFY
SASFPQYMMKIDNDIAQQKGITIDNAMNTLSTLVGSNYEISFIKYDRQYKVIVQTSPEYR
ALPEDIMKLYVKNSRDEMVPFSAFMKMEKVYGLSEITRHNMYNASEISGQSAPGYSSGQA
IKAIQDVAQKKLPRGYGIDWAGISKDEVGRGNEAIYIFLICLLFVYLVLAAQYESFVLPF
AVILSLPAGIFGSFLLLSMCGLENNIYAQVAFVMLIGLLGKNAVLIVEFAVQKHEAGATI
LEAAMEGAKVRFRPILMTSFAFIAGLVPLALASGPGKIGNRTIGTAALGGMLLGTVIGVL
LIPGLYYIFGSIAAKIKMVKKQNNNPLTEEIDHNV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatttatagaaagaccagtactatcgatagtaatatcgctaatgattgtc
ttgcttggggtgttggcaatgaccagtttacctgttactcaactaccttccatttcgcct
ccaaaagtgaatgttgcagcctcatatcctggagctaataatgaattattaattaaagca
gttgtaatccctttagaaagagctataaatggagttcctggaatgaaatatattgcttct
gatgcaggaaatgacggagaagcttcaatacaagttatttttaatttaggaacagatccc
aatcaggcttctattaacattcaaaacagagtagcatcggtagtaaataaattaccacca
cttgttgttcgtgaaggcgtaaaaattactagagaagaatctaataatttaatgtacata
aacttgtatagtaaggatccaacgatggaccaaaagttcttatttaactttgcagatatt
aacctaatttcagaactaaaaagagttaatggagtaggggttgcagatattgttgggaac
agagaatatgcgatgcgtgtttggttgaagcctgaccgaatgttagcgtataaaatttct
gcagcggaagtcatggaagcattaagccaacaaagtttagaagctgcaccaggaaaaaca
ggcgaaagttccggcaaacgatcgcaagcctttgaatatgttttaaaatattcgggtcgt
tttaccactcaagaacaatacgggaatataattataaaatctagtccaaacggagaaata
cttcgacttaaagatgtggccaatatcgaatttggaagttcgatgtatgatatttattct
aacctaaacggaaatccatcggcagcaattactatcaaacaatcttacggaagcaatgcc
agtcaggttattaaagatgtaaaagcaagattagaagaaataaaaaaagaatcttttcca
aaaggaattgattatgaaattagttatgatgcctctaaatttttagatgcctctatagaa
aaagtactgcacactttaatagaagcatttattcttgtaggattagttgttttcttattt
ttaggaaattggcgttctacaataatcccagcaattgcagtacctgtatcgcttgtagga
acatttgcttttatgaacttttttgggataaatataaatttagtaacactatttgccctt
gtattagctattggtgtggttgtagatgatgccattgtagtcatcgaagccgtacacgcc
aagatggaagaagagcacttaggaccactcaaggctactaaaaaagccatgcacgaaatt
agcggtgctattattgctattacttttttaatggctgctgtgtttattcctgtggctttt
atgtcaggaccagtaggtatattttaccgtcagttttctatcacaatggcaactggtatc
attttgtcaggtattgtagcactaacacttacccctgcactttgtgcaatgatgctcaaa
aaaacgcacggtgtagctagaaagaaaacccctttaaataattttttagatggttttaat
cataaattcgagcaacttacaggaaaataccaaggagtactcggaaaaattgttaacaaa
agatcgattacttttatagcttttataggtttctgtacaggaatatttttcttaaacaat
agtttgccaacaggttttattccaaatgaagaccaaggaatgttttatgctattatacaa
acacctccaggatcatctcttgaaagaaccaatgatgtggctttaaaattgcaaaaaatt
tcagaaaaaattgaaggtgttaaatctgtatcagcattggcaggttttgaaatattaacc
gaaggaacaggcgccaattctggaacttgtttggttaacttaaaaaattgggaagaccgc
aagcattccgcaaatgagattatgaaagagctcgaagaaaaatcgaaagatattactgga
gcaacactcgaattttttcaaccgccagctgtaccaggttatggagctgcaggaggattc
gagttgcgtttgttagacaaagctgggtcaggcaattttaaaaaaatggaaacggtaaat
aatgatttcgtaaaagaacttaacaaacgtcccgaactatcctctgtttttagcttttat
agtgctagttttccgcagtatatgatgaaaatagacaacgatattgcccaacaaaaaggc
attacgattgacaatgcgatgaatacactttctactttggtaggtagtaattacgaaatt
agttttattaaatacgatagacaatataaagtaattgtacaaacatcgccagaatacaga
gccttaccagaggatattatgaagttatatgtaaaaaatagccgtgacgaaatggtcccg
ttttctgcatttatgaaaatggaaaaagtatatggtttgtctgaaattacaagacacaat
atgtacaatgcttctgaaataagcggacaatctgcaccaggatacagtagtggtcaagcc
attaaagcaatacaagatgttgcccagaaaaaattaccaagaggatacggtatagattgg
gcaggaatttctaaagatgaagtaggtagaggtaacgaagctatttatattttcttaatc
tgtttgctgtttgtttatttagttttagcagcacaatacgaaagttttgtattaccattt
gctgtaattctatcacttcctgcgggtatttttggatcatttttattgctttccatgtgc
ggattagaaaataacatttatgcacaagtagcctttgtaatgcttataggattattaggt
aaaaatgcggttctgattgttgaatttgccgttcaaaagcacgaagcaggagccactatt
ttagaagcagctatggaaggtgcaaaagtacgattcagacctattttaatgacttcattt
gcctttattgcaggattggttccattagcacttgcttccggaccgggtaaaattggtaac
agaaccattggtactgctgctcttggaggtatgcttctaggaacagtcataggagtatta
ctaatacctggattgtattatatatttggtagtattgctgcaaaaattaagatggtcaaa
aaacaaaataacaatccattaaccgaagaaattgatcacaatgtataa
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