Flavobacterium psychrophilum V4-24: IA04_08710
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Entry
IA04_08710 CDS
T03660
Name
(GenBank) multidrug transporter AcrB
KO
K18138
multidrug efflux pump
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw01501
beta-Lactam resistance
fpw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IA04_08710
01503 Cationic antimicrobial peptide (CAMP) resistance
IA04_08710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpw02000
]
IA04_08710
01504 Antimicrobial resistance genes [BR:
fpw01504
]
IA04_08710
Transporters [BR:
fpw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IA04_08710
Antimicrobial resistance genes [BR:
fpw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IA04_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
RimP_N
DUF5034
Motif
Other DBs
NCBI-ProteinID:
AIG37352
UniProt:
A0A075S830
LinkDB
All DBs
Position
complement(1888635..1891859)
Genome browser
AA seq
1074 aa
AA seq
DB search
MQEGISGKIAHFFINSKLTILLMVGLMIIGVYSSFLIPREEEPQINVPMADVMVGYPGAS
PSEVESRVVKPLEKILSNIKGVEHVHSMAMNGQAVLIVQFYVGQDVERSYVKLYDELAKH
ENMFPQGVYKPMVKTRSIDDVPMLGLTLWSEKLDDFEIRQIAEEVTSEVEKVKDVAITRE
IGGRNRQVKVVLDKDKMAENGVDALGIMQMIQANNGSSQSGSFVANDQEYLVTTGQFLKS
SEDVENLVVGVNANLPVYLKQVASIQDGPATPSSYVSFGYGKANEKFETAQSEYPAVTIS
VGKVKGADAMKISEKILERVEQLKKTIITDDVHVEVTRNYGETASDKVGELLMHLAIAII
AVTFLVILAMGWRGGLVVFFSVPLTFALTLFAYYLLGYTLNRITLFALVFVVGIVVDDSI
IIAENMHRHFKMKRLPFKQAAIYAINEVGNPTILATFTVIAAILPMAFVSGMMGPYMSPM
PIGASIAMLLSLFVALTVTPYLGYHLLQEKDEQKHKEEEGLETNWIYKIYNKLERPLLES
SKKRRILIGLTVLLLIGSVTMFFTKLVIVKMLPFDNKNEFQVVIDMPEGTTLERTAAVTQ
EIAQYLSTVPEVVNYQNYIGTSAPITFNGLVRHYDLRGGSNMADIQVNLLHKENRDLQSH
GIAKIVRPEVQKIAKKYGANVKIIEVPPGPPVLSTLVAEIYGPNYKDQIKVANQVKGILE
TTSDIVDVDWMTEDNQTEYKLEVDKEKAMLNGIAPQQIIGNLTYLLKEYPVSNLYDENSN
DNVGIVLSLDDKDKTSLQDIENLKIKGSRGNVVPVSDLVKVIKDTLQKTIYRKDQKRVVY
VTADMAGALESPVYAILGMNEKLQKMHLPKGYKVNELYMDQPSDESDFTVKWDGEWQITL
EVFRDLGVAFMVVIVIIYMLIVGWFQNFKTPMVMMMAIPLSLIGIVFGHWLLGAFFTATS
FIGMIALAGVMVRNSVLLIDFIEIRLHDGIPLKQAIIEAGAVRTTPILLTTGAVVIGASI
ILFDPIFQGLAISLVFGAIVSTILTLLVVPIIYYVTERKKWEKTVEETDNDIIN
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaggtatatcaggtaaaatagcacatttttttattaattcgaaattgaccatt
ttgttgatggtgggtttgatgataattggagtgtacagctcgtttttaattccgagggaa
gaagagccacaaataaatgttcctatggccgatgtcatggtgggttatcccggtgctagc
ccaagtgaagtagaaagtcgtgttgtaaaaccattagaaaaaatattatctaatataaaa
ggggtagaacacgtgcatagtatggcgatgaacgggcaagcggttttgattgttcagttt
tatgttgggcaagatgttgaacgttcgtatgtaaaattgtatgacgaattggcgaaacac
gaaaatatgtttccgcaaggggtgtacaaacctatggtaaaaacacgttctattgacgat
gttccgatgttgggattaacgctttggagtgaaaaattagatgattttgaaattcgtcaa
attgccgaagaagttacctctgaagttgagaaagtgaaagatgttgccattactagagaa
attggaggtagaaaccgccaagtaaaagtagttttagataaagataaaatggccgaaaat
ggtgttgatgctttgggaattatgcaaatgattcaagccaataatggtagctcgcaatcg
ggaagttttgttgctaatgaccaagaatatttggttactacgggacagtttctaaaatca
tcggaagatgttgagaatttagttgttggtgtcaacgctaatttgccagtttatttaaaa
caagtggcttcgatacaagacggacccgctacaccaagtagttatgtttcttttgggtat
ggcaaggctaacgagaaatttgaaactgcacaatcagaatatccagcagtgactatttct
gtcggaaaagtaaaaggtgccgatgcgatgaaaatatcagaaaaaatattagagcgagta
gagcaacttaaaaaaacgattatcaccgatgatgtacatgtagaagtaactcgtaattac
ggagaaacagcttcagataaagtaggtgaattattaatgcacttagcaattgctattata
gccgttacttttttagtaatattggctatgggatggcgtggcggattggtcgttttcttc
tctgttcctttgacgtttgctttgaccttatttgcttattatttgttaggttatacttta
aatagaatcacgctttttgctttggtttttgtggtaggaattgttgttgatgatagtatt
attattgccgaaaacatgcaccgtcatttcaaaatgaagcgactaccgtttaaacaagct
gctatttatgctataaatgaagtaggaaatccaactatattagccacatttacagtaatt
gctgcaattttacctatggcatttgtatctggaatgatggggccttatatgagtccgatg
cctattggtgcttcgattgcgatgttactttcgttatttgttgccttgactgtaacgcct
tatttggggtatcatttgcttcaagaaaaagacgagcaaaaacacaaagaggaagaaggt
ttagaaaccaattggatttataaaatttacaacaaattagaacgtccgttattagaaagt
agtaaaaaaagaagaattttaatcggactaacggttttgcttttaataggttcggttaca
atgttttttaccaaattggtgattgtaaaaatgttgccttttgataataaaaacgaattt
caagtagtgattgatatgcccgaaggaaccactttagaaagaacagcggcagtaactcaa
gaaattgcacaatatctttctactgttccagaagtggtaaattatcaaaattatatcgga
acatcagcacctataaccttcaacggattagtacgtcattacgatttacgtggtggcagt
aatatggcagacattcaggtcaatttgttgcacaaagaaaatcgtgacttacaaagtcat
ggcattgctaaaatagttcgtcccgaagtgcaaaaaatagccaaaaaatatggtgccaat
gtaaaaattatcgaagttccgccaggaccaccagtattatctactttggttgccgagatt
tatggtccaaattacaaagaccaaattaaagtagccaatcaggtgaaaggtattttagaa
acgacttcagatattgtagatgtcgattggatgaccgaagacaatcaaacagaatacaaa
cttgaggtagataaagaaaaagccatgctaaacggaattgcgcctcaacaaattattgga
aatttgacttatttattaaaagaatatccagtttctaatttatatgatgaaaattctaat
gacaatgtaggtattgtgctttcgctcgacgataaagacaaaacttcattacaagacatc
gaaaatctgaaaataaaaggcagtcgtggtaatgtagttcctgtaagcgatttggtaaaa
gtgattaaagatactttgcagaaaaccatttacagaaaagatcaaaagcgagtggtttat
gtaactgccgatatggctggagccttagaaagtcctgtatatgccattttaggaatgaat
gaaaaactccaaaaaatgcacttgccaaaagggtataaagttaatgagttgtatatggat
caaccatcggacgaaagtgattttaccgtaaaatgggacggagaatggcaaattacacta
gaagtatttcgtgatctaggtgtagcttttatggttgttattgttattatttatatgttg
atcgtaggttggtttcaaaattttaaaaccccaatggtcatgatgatggcaataccacta
tcgttaataggaattgtattcggacactggttgttaggtgccttttttacagcaacgtct
tttataggaatgattgctttggctggagtaatggtacgaaactcagttctattaatagac
tttatagaaatccgactccacgatggtattccgttaaaacaagccattattgaagcaggc
gctgtgagaacaaccccaattttactaaccactggagcagtagttattggcgcatctatc
atattatttgatccaatctttcaaggattagccatttcgttagtatttggagccattgtt
tctacgatattaaccttgttagtagtgcctattatttattatgttactgaaagaaaaaaa
tgggaaaaaactgttgaagaaacagataacgacatcattaattaa
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