Fretibacter rubidus: AB6B37_00175
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Entry
AB6B37_00175 CDS
T10733
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
frb Fretibacter rubidus
Pathway
frb00020
Citrate cycle (TCA cycle)
frb00785
Lipoic acid metabolism
frb01100
Metabolic pathways
frb01110
Biosynthesis of secondary metabolites
frb01120
Microbial metabolism in diverse environments
frb01200
Carbon metabolism
frb01210
2-Oxocarboxylic acid metabolism
Module
frb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
frb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB6B37_00175
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB6B37_00175
Enzymes [BR:
frb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AB6B37_00175
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
DUF5601
Motif
Other DBs
NCBI-ProteinID:
XER20419
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Position
34344..37316
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AA seq
990 aa
AA seq
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MTARSEKNQQMLDTLYLDGANALYLEQMQARFAQNPNSVDPSFRAYFESLDEASDAVKKT
AAGPTWKRPDWPLDPNGDLTSALTGDYGDAPAALEKQAASKVASANPDMNDAAVRQAAKD
SVGALMIIRAYRVRGHLIANLDPLGLQKSGLHPELDPESYGFTDADFDREIFLDGVLGLE
YATMNQIMEILRRTYSSTLGVQFMHVSNPEEKAWIQERIEGPDKEISFSKEGRMAILQKL
VEGEAFEQLIHKRYPGTKRFGLDGAESLLPALEQIIKRGGQLGLKDINFGMPHRGRLNVM
ASVMQKPYSAIFYEFLGGVASGAEDFGSGDVKYHLGVSDDREFDGNSVHLSLAPNPSHLE
VVAPVVMGKARAKQQMASGTYRTHNPEEVMAVILHGDSAFAGQGIVMECFQMSQLAGYRT
GGTIHVIVNNQIGFTTTPDEYRSGQYCSDVAFMVEAPVFHVNGDDPEAVVYAARVATEYR
QKFGKDVVLDIICYRRYGHNEGDDPSFTQPIMYAKIGDMPSTMSVYAKRLIDQGDVTQAE
HEKMVEDFYGYLDAEFDKAKTYETKAPDWLQGVWQGLSQPTEGDGKRRGDTSVSVDRLKD
IGTKITTVPNSVNIHRTLKRIIKARAEKVAAGENIDWGLAEHLAFGTLITEGHPVRLSGQ
DSERGTFSQRQSNFIDQKTEEKYTPLNQLSDDQEYYQVLNSHLSEEAVLGFEYGFSGAAP
HALTIWEAQFGDFANGAQVLVDQFISSAEQKWLRMSGLVMLLPHGYEGQGPEHSSARLER
YLQMCAEDNMQVTNVSTPANYFHVLRRQVKRKFRKPLINMSPKSLLRNKLCVSTFAEMGE
GSEFHRLLWDDAHYKPEISQLKLAKDKDIKRLIICSGKVYYDLFEAREELGRNDIYLLRV
EQLYPYPSDAMELELARFKNAEMVWVQEEPKNMGAWAFIEPFIEESLTNIGAKNTRARYV
GRKAAASTATGIAAKHKKEQQAIIDGAFAK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgctctgaaaaaaatcagcaaatgctggacacactttatctggatggggcc
aatgcgctttatctggagcagatgcaggcgcgatttgcgcaaaatccaaacagtgttgac
ccaagctttcgcgcttattttgagagcctggacgaagcctctgatgcggtaaaaaagacg
gccgctggcccgacgtggaaacgccccgattggccgcttgacccgaacggtgatttgaca
tcggctctgaccggggattacggcgacgccccggctgcgctggaaaaacaagccgcaagt
aaagtcgcgagcgctaacccagatatgaacgacgctgccgtccgccaagccgcaaaggac
agtgtcggcgccttgatgattattcgcgcctaccgcgtgcgcgggcatttgattgctaat
cttgacccgctcggtctgcaaaagtctggtctacatccagagcttgacccagagagctac
ggtttcacggatgctgattttgaccgcgagattttcctcgacggtgtgctgggccttgaa
tatgcgaccatgaaccaaatcatggaaattctgcgccgcacctatagctccaccctcggt
gtgcaatttatgcatgtgtccaacccagaagaaaaagcctggatccaagaacgtatcgaa
ggccccgataaagagattagtttttcaaaagaaggccgcatggccatcttgcaaaagctg
gtcgagggcgaagcgtttgagcaattaattcacaaacgctatcctggcacaaaacgcttt
ggtcttgatggggccgaaagcttactgcctgcgctggagcaaattattaagcgcggcggt
caactgggtctaaaagatattaatttcggtatgccgcaccgcggacggctgaacgtcatg
gcgtctgtcatgcaaaagccctattcggccatcttttacgaatttttgggcggtgtggcg
tcaggggccgaggactttggatcgggtgatgtgaaatatcacttgggcgtgtctgacgac
cgtgaatttgacggcaatagtgttcatctatcactcgccccaaacccgtcgcatctggag
gtcgtggcccccgttgtgatgggcaaagcgcgcgccaagcaacaaatggcgtcaggtact
tatcgcacgcataatcccgaagaagttatggccgttatcttgcacggcgatagcgccttt
gcgggccaaggtatcgtcatggaatgtttccaaatgagccagctggccggataccgcacg
ggcggcacaatccatgttattgtgaataatcaaatcggctttacgaccacgccggatgaa
taccgttcgggtcaatattgctctgacgtggcctttatggtcgaagcgcctgtattccat
gtgaacggcgatgaccccgaagctgtggtttacgccgcgcgcgtagcgactgaataccgc
caaaaatttggcaaagacgtggtgctggatatcatatgttaccgccgttacggccataac
gaaggcgacgatccgtctttcacccaaccgattatgtatgccaaaatcggcgatatgccg
tccaccatgtctgtctatgccaagcgcctaattgaccaaggcgacgtgacacaggcagaa
catgaaaaaatggtcgaagacttctatggctatttggacgctgaatttgacaaagccaaa
acatatgagacgaaagcacccgattggttgcaaggggtttggcaaggtcttagccaacca
acggaaggcgacggtaaacggcgcggcgacacatcggtgtctgttgaccgcttaaaagac
atcggcacgaagattacgactgttccaaattctgtgaatattcaccggacgcttaaacgc
atcatcaaagcccgggccgagaaagtcgcggcaggtgaaaatatcgattggggtctggcc
gaacatctggcctttggcacattgatcaccgagggccaccccgtgcgcctatcgggtcaa
gacagtgaacgcggcacgttttcgcaacgccaatcaaatttcatcgatcaaaagacggag
gaaaaatataccccgttgaaccaattgtccgatgaccaggaatattaccaagtcttgaac
tcgcatttatcagaagaagcggtactgggttttgagtatggtttttcaggggcggccccc
catgcgctcacgatttgggaggcgcaatttggtgatttcgccaatggcgcgcaggtcttg
gttgaccagttcatcagctccgctgaacaaaaatggctccgtatgagcggcctcgtgatg
ctcctgccccatgggtatgaaggccaaggcccagagcatagctcggcgcgactggaacgt
tacctacaaatgtgcgccgaagataatatgcaagtgaccaatgtgtccacgccggccaat
tatttccacgtgctgcgccgtcaggtgaaacgcaaatttagaaagccgcttatcaatatg
agccccaaatcgctcttgcggaacaagctctgcgtctcgacctttgccgagatgggcgag
gggtcagaatttcatagattattgtgggatgatgcccattataaacccgagatcagccag
ctaaaactggccaaggataaagatatcaagcgccttattatctgttcgggcaaggtttat
tatgacctgtttgaagcgcgcgaagagctaggccggaatgatatttacctccttcgggtt
gagcaactttacccctatccgtctgatgcgatggagctagagcttgcgcggtttaaaaat
gcggagatggtttgggttcaagaagaacctaagaatatgggggcgtgggcctttatcgag
ccgttcattgaagaaagcctgacaaatatcggggcgaaaaacacgcgcgcacggtatgtg
ggacgcaaagctgcggcctcgacagcgaccggtattgccgctaaacacaagaaagaacag
caagccatcatcgatggtgcctttgcgaaatag
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