Fretibacter rubidus: AB6B37_07325
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Entry
AB6B37_07325 CDS
T10733
Name
(GenBank) class III extradiol dioxygenase subunit beta
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
frb Fretibacter rubidus
Pathway
frb00362
Benzoate degradation
frb00627
Aminobenzoate degradation
frb01100
Metabolic pathways
frb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AB6B37_07325
00627 Aminobenzoate degradation
AB6B37_07325
00624 Polycyclic aromatic hydrocarbon degradation
AB6B37_07325
Enzymes [BR:
frb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
AB6B37_07325
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
XER21764
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Position
1544171..1545016
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AA seq
281 aa
AA seq
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MAKITAGVATSHVPLIGVGIDQGKQNDPYFKPIFAGYEWTKEWISKPENKPDVVVLIFND
HASAFGQNLIPTFSIGCAEEFAPADEGWGPRLVPNVKNHPDLAWHIAQSLIIDEFDMTII
NEMDVDHGLTVPLSAMFGQPDAWPTLVVPIMVNVITYPIPSGDRCFRLGQAIARAVESFP
EDLNVQIWGTGGMSHQLQGPRAGLINQEWDQKFLDDLTADPERLRTIPHIEYLRETGSEG
IEMVMWLVMLGALDAPKELHRHYHVPASNTALGHIVLENNP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattaccgcaggcgtcgcgacaagccacgtacctttgattggcgtaggtatt
gatcaaggcaaacagaatgacccttatttcaagccaatctttgctggttatgaatggaca
aaggaatggatcagtaaaccggaaaacaaacctgatgtcgttgttttaatcttcaatgat
cacgcctcagcttttgggcaaaatttgattccaacattttccattggctgcgctgaagag
tttgcgcccgctgatgaaggttgggggccacggctggttccgaatgtcaaaaaccaccca
gacctcgcctggcatatagcgcaaagtctgatcatcgatgagtttgacatgactattatc
aatgaaatggatgttgatcacggtctgacagtgcccctttccgctatgtttggtcagccg
gatgcatggcctacactcgtcgtgccgattatggtcaatgtaatcacctatcccatccct
tcgggcgatagatgttttcgtctcggacaagcgattgcgcgtgccgtggagagttttccc
gaagacttgaacgttcaaatttggggaacaggcggcatgagccaccagttgcaaggcccg
cgagcaggattgataaatcaggaatgggatcaaaaattcctagatgatttaacggcggat
cccgagcgcctgcggaccattcctcatatcgaatatttacgagaaacagggtcggaaggc
attgagatggttatgtggcttgtcatgctcggcgctcttgatgcccccaaagaattacac
cgtcattatcacgtccccgcatccaataccgcgctcgggcatattgttttggagaataac
ccatga
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