Fretibacter rubidus: AB6B37_13985
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Entry
AB6B37_13985 CDS
T10733
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
frb Fretibacter rubidus
Pathway
frb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB6B37_13985 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frb03400
]
AB6B37_13985 (nth)
Enzymes [BR:
frb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB6B37_13985 (nth)
DNA repair and recombination proteins [BR:
frb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB6B37_13985 (nth)
Prokaryotic type
AB6B37_13985 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XER20021
LinkDB
All DBs
Position
complement(3016318..3017007)
Genome browser
AA seq
229 aa
AA seq
DB search
MRAKPEVLAKNLPRPRLNRAQISDIYRHLQSLDPAPRTELNYSNPYTLVVAVALSAQSTD
VGVNKATKALFAKADTPQKMLALGEDVVRDHIKTIGLYRNKAANVIKLSQMLVDDFGGIV
PGNRDDLIKLPGVGRKTANVVLNEAFGQPTMAVDTHIFRVANRTGMAPGKDVVQVEHNLL
RVTPDEFALHAHHWLILHGRYTCVARTPKCFNCAISEICKYSKKTKAVD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccaagcccgaagttctggcgaaaaacttgccgcgcccacgcctaaaccgcgcc
caaatttctgatatttatcgccacctccaaagtcttgatcccgccccgcgcacagagctg
aattactcaaacccctatacgctggtagttgctgtggcgctctctgcgcaaagcacagac
gtcggcgtgaacaaagcgacgaaagcgctatttgccaaagccgacacaccgcaaaaaatg
ctagcgctgggcgaagatgttgttcgcgaccacataaaaaccatcggcctttaccgcaat
aaagcggccaatgtgataaagcttagccagatgctggttgatgattttggcggtattgtg
ccgggtaatcgtgatgatcttatcaagcttcctggtgttggacgaaagacggccaatgtg
gtgctgaacgaagccttcggtcaaccgaccatggccgtggacacccatattttccgcgtc
gcgaaccgtacaggcatggcccctggcaaggacgtggtgcaggtcgagcataatctactg
cgcgtcacaccagacgagttcgcacttcacgctcaccactggcttatcctgcacggacgc
tacacctgcgtcgcccgcacacccaaatgctttaactgcgccattagcgagatttgcaaa
tatagcaaaaagacgaaggcggttgattaa
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