Pseudofrankia inefficax: FraEuI1c_6723
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Entry
FraEuI1c_6723 CDS
T01354
Name
(GenBank) cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00260
Glycine, serine and threonine metabolism
fri00270
Cysteine and methionine metabolism
fri00670
One carbon pool by folate
fri01100
Metabolic pathways
fri01110
Biosynthesis of secondary metabolites
fri01230
Biosynthesis of amino acids
Module
fri_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FraEuI1c_6723
00270 Cysteine and methionine metabolism
FraEuI1c_6723
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FraEuI1c_6723
Enzymes [BR:
fri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
FraEuI1c_6723
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
PG_isomerase_N
TrAA12
Motif
Other DBs
NCBI-ProteinID:
ADP84692
UniProt:
E3JCA3
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All DBs
Position
8224476..8226092
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AA seq
538 aa
AA seq
DB search
MRIHDDSGGVDVPGDDRRGRVVDRVTDLIGNTPLVRLTEAVTAAARLWPADGAPGEGSRG
GAPLLGKLEYVNPGGSVKDRIAVAMVDAAERDGRLRPGGTIVEPTSGNTGVGLAMIAALR
GYQCVFTMPDKISEEKRAVLRAYGAEVLVCPTAVDPDDPRSYYSVARDVTRRTPGAWSPD
QYSNPDNPAAHRASTGPEIWRDTGGRVTHFVAGIGTGGTISGAGQYLKEVSGGRVQVIGA
DPEGSVYSGGSGRPYLVEGVGEDIWPATFDKTVVDRVEAVSDRDSFLMTRLLAREAGLLV
GGSCGLAVVAATRVARALGPDDLVVVLLPDSGRGYLSKIFNDEWMYDYGFLDPPSDEPVV
GAVLASKHTSNGRAGGNGRAGGNGRAGGNGRAGGNGRAGGNGRAGGRLAASRPGGSAAPE
LVHVHPDETVGAAISYLREYNVSQMPVVRHEPPLRAAEVAGAVLERELLAAVFADRAVID
APVAAHMSAPLPTIGAGEPLSTLVEALGSDDPAVLVLDSGNPVGILTRADLLSFLAAR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccacgacgactccggcggcgtcgacgtccccggtgacgaccgccgcggcagg
gtcgtcgaccgggtgaccgacctgatcgggaacaccccgctcgtccggctcaccgaggcc
gtcacggccgccgcgcgcctgtggccggccgacggagcacccggggagggctcgcgcggc
ggggcgccgctgctcggcaagctggagtacgtcaacccgggcggctcggtgaaggaccgg
atcgcggtggcgatggtggacgcggccgagcgggacggccggctgcgccccggcgggacg
atcgtcgagccgacgagcggcaacaccggcgtgggtctcgccatgatcgcggcgctgcgc
ggctaccagtgcgtgttcaccatgcccgacaagatcagcgaagagaagcgcgcggtgctg
cgtgcctacggcgccgaggtcctcgtctgcccaacagcggtcgacccggacgacccgcgc
tcctattactctgtcgcccgcgacgtcacccgccggaccccgggcgcctggagccccgac
cagtactccaacccggacaacccggccgcgcaccgcgccagcaccggcccggagatctgg
cgggacaccggcgggcgggtgacgcacttcgtcgccggcatcggcaccggcgggacgatc
agcggggccgggcagtacctcaaggaggtcagcggcggccgggtgcaggtgatcggcgcc
gacccggagggctcggtctactccggcggcagcggccggccctacctggtcgagggcgtc
ggcgaggacatctggccggccacgttcgacaagaccgtcgtcgaccgcgtcgaggcggtc
agcgaccgggactcgttcctgatgacgcggctgctggcccgggaggcggggctgctggtc
ggcggctcgtgcgggctcgccgtggtcgccgcgaccagggtcgcccgcgcgctcgggccg
gacgacctggtcgtcgtgctgctgcccgactccggccgcggctacctttcgaagatcttc
aatgacgagtggatgtacgactacggcttcctcgacccgccgtcggacgaaccggtcgtc
ggggcggtcctggccagcaagcacacctccaatggcagggctggcgggaacggcagagct
ggcgggaacggcagagctggcgggaacggcagagctggcgggaacggcagagctggcggg
aacggcagagctggcggcaggctggctgccagccggcccggcgggtccgcggcgccggag
ctggtgcacgtgcatcccgacgagaccgtcggcgcggccatctcctacctgcgcgagtac
aacgtctctcagatgccggtggtccggcacgagccgccgctgcgggccgccgaggtcgcc
ggcgcggtgctcgaacgcgagctgctcgcggccgtcttcgccgaccgggccgtgatcgac
gcaccggtcgccgcgcacatgtcggccccgctgccgacgatcggcgcgggcgagccgctc
tcgaccctggtcgaggcgctcggcagcgacgatccggccgtcctcgtgctcgacagcggg
aacccggtcggcatcctcacccgcgccgatctcctcagcttcctggccgccaggtga
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