KEGG   Fastidiosipila sanguinis: C5Q98_01940
Entry
C5Q98_01940       CDS       T05345                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
fsa  Fastidiosipila sanguinis
Pathway
fsa03030  DNA replication
fsa03410  Base excision repair
fsa03420  Nucleotide excision repair
fsa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C5Q98_01940
   03410 Base excision repair
    C5Q98_01940
   03420 Nucleotide excision repair
    C5Q98_01940
   03430 Mismatch repair
    C5Q98_01940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fsa03032]
    C5Q98_01940
   03400 DNA repair and recombination proteins [BR:fsa03400]
    C5Q98_01940
Enzymes [BR:fsa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C5Q98_01940
DNA replication proteins [BR:fsa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C5Q98_01940
DNA repair and recombination proteins [BR:fsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C5Q98_01940
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C5Q98_01940
   MMR (mismatch excision repair)
    DNA ligase
     C5Q98_01940
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C5Q98_01940
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH RNA_ligase Nlig-Ia RTT107_BRCT_5 HHH_3 zf-tcix
Other DBs
NCBI-ProteinID: AVM42067
UniProt: A0A2S0KM35
LinkDB
Position
473565..475619
AA seq 684 aa
MNESPKKDHKYYLDLKDRVLALNDAYYNHDQSEVSDFVYDQLLHELEELEQEHPEWQEID
SPTIKVGGKASEVFSKVNHDVKMESLQDFFSVEDIDSFVRRTQRELSYEAEFVVEEKIDG
LSVSLEYEKGIFVRGATRGDGLVGEDVTLNLLEISDVPRVMLHDKPERLVVRGEIYMTKS
AFIRLNEIQEKNGVKLFANPRNAAAGSLRQLDPKITANRDLSLFCFNIQLVEGMEFSTHQ
ETLKFLARNGFKIIDLEKVARTTEEIDNLIIEIEERRSRLDYGIDGAVIKLNSLKDREKL
GSTSKYPRWAAAYKYPPEQVETKLLDIQVNVGRSGKLTPLAILNPVVVDGSTVSKATLHN
EDYIAEKDIRIGDMVKVQKAGDVIPEISTVVFDKRPINTEKFMMPLTCPVCGADAVRKTG
EAARICVNEDCPAKLKRKLEHFVSRNCMYIDGLGEKNIELFLDLGLINDLADIYLLKNHR
DDLLKLPGYGEKSIDKLLEAIESSKNNSMENFLAALGIQFIGANTASLISEVVPDIDTLM
MMTAANLEDIPGVGQASANAIVEYFNNPINLELIEKFRSLGLNFKSYSYKDQASREAESE
LPWTGLKAVVTGTLENYKRQEAELKLKELGAQVLSSVSKNVNFLLAGENAGSKLDKALNL
DIKIINENEFIEALNKPEKFREDL
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgaatgaatctccaaagaaagatcataaatattacttggatttgaaagatcgtgtttta
gctttaaatgatgcttattataatcatgaccaatctgaagtttcagattttgtgtacgat
cagctattacatgagctagaagaattggagcaagaacatccagaatggcaagagatagat
tcacctaccataaaagttggtggcaaagcttctgaagttttttcaaaagttaatcatgac
gtcaaaatggaaagtttgcaagatttcttctcagtagaagatattgacagctttgttaga
agaactcaaagagagctatcatacgaagctgaatttgtcgtggaagaaaagatagatggt
ctatcagtttctttggaatatgaaaaaggtatatttgttcgaggagcaactagaggagat
ggtttagttggtgaggatgttactttaaacctactagaaatttccgatgtgccgagagta
atgctgcatgataagccagagcgactagtagttcgtggagaaatctatatgactaaatct
gcgtttattagattgaatgaaattcaggaaaaaaatggtgttaaactttttgccaatcct
agaaacgctgctgcaggttctttaagacagttagatcctaaaataactgcaaatagagat
ttatcgctattttgttttaatatacaactggtagaagggatggagttctctacacatcag
gaaactctgaagttccttgccagaaatggattcaaaataattgacttggaaaaagttgcc
agaacaactgaagaaatagataatttaataattgaaattgaggaacgaagatctagactg
gactatggaattgatggagctgttataaaacttaattcactgaaagacagggagaagctg
ggttcaactagtaaatatccacgctgggcagctgcttataagtatccaccagaacaagta
gaaactaaattgttagatattcaggtgaatgttggtagaagcggtaagctcacacctttg
gccattctaaatccagttgtagtagacggatcaactgtttcaaaagccactttgcataat
gaggactatattgcggaaaaagatataaggattggtgatatggttaaggtgcaaaaagct
ggtgatgttataccagaaattagcacagtcgtttttgataaaagacctataaatacagag
aagtttatgatgccgctcacatgtccagtctgtggagccgatgctgtcagaaagacaggt
gaagcagcgagaatttgtgtgaatgaagattgtccagctaaacttaaaagaaaacttgaa
catttcgtttctagaaactgtatgtatatagatggacttggcgaaaaaaatatagaatta
ttcttggatttaggcttaataaatgatttggcagatatttatttgttaaagaatcatcga
gatgatttacttaagctcccgggttatggggaaaagagcatagataaacttttagaagcg
attgaatcaagtaagaacaactctatggagaacttcttagcagcgttaggaattcagttt
attggagcaaatacagctagtttaatttcagaggtggttccagatatcgatacacttatg
atgatgactgcagcaaatttagaagatatacctggagttgggcaggcgtctgcaaatgct
attgtagaatattttaataatccaataaatctagaactaatagagaagtttagaagttta
gggcttaatttcaaatcatatagttacaaagatcaggctagtagagaggcagaaagtgaa
ttaccttggactggattaaaagctgttgttactggtactttagaaaattataagagacaa
gaagcggagttgaaacttaaagaactaggagcccaagtattatcttcagtttcgaaaaat
gttaatttccttctggctggtgaaaatgctggtagcaagttagataaagcattgaatcta
gatattaaaataataaatgaaaatgaatttattgaagctttaaacaaacctgagaagttc
agagaggatttatag

DBGET integrated database retrieval system