Candidatus Fervidibacter sacchari: Q2T83_06965
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Entry
Q2T83_06965 CDS
T09227
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q2T83_06965 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsh03400
]
Q2T83_06965 (nth)
Enzymes [BR:
fsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q2T83_06965 (nth)
DNA repair and recombination proteins [BR:
fsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q2T83_06965 (nth)
Prokaryotic type
Q2T83_06965 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF2400
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WKU17555
LinkDB
All DBs
Position
1533380..1534063
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AA seq
227 aa
AA seq
DB search
MRVDEKTIREVDKLLAEVYGDRKWRRHAEPIDELIATVLSQHTNDINRDRAFRQLKKRFP
SWEQVLRAPVRSIASAIKPAGLSNQKAPRIKAMLKQISEANNGNLSLEFLAGMPADEAIN
WLKRLPGVGPKTAACVLLFSFGKPVFPVDTHILRISKRLGWLDEKVTEAKANELLDRVVP
NEIKYRLHLNMIAHGRRICRPQNPRCQECAIKHLCEYFRKRKEAGSI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgagggttgacgagaaaaccatccgtgaagttgacaagttgctcgcagaagtctacggt
gaccgaaagtggcgacgccatgctgaaccgatagacgaactaatcgcaacggtgctctcc
cagcacactaacgacatcaaccgagatagggcttttaggcaactcaaaaagcggtttcct
tcgtgggaacaggttttgcgagcgcccgtccgttcaatagcgtctgcgatcaagccggcg
ggtctgtcaaaccaaaaagcgccgagaattaaagcgatgctgaagcaaatttctgaagcc
aataacggcaatttgtcccttgagttcctcgcagggatgccagccgatgaggctatcaat
tggctcaaaaggttgccgggtgtcggaccgaaaactgcagcctgtgttttgctcttcagt
ttcgggaaacccgtctttccagttgacacccacatccttcggataagcaaacggcttggt
tggttggacgaaaaagtgacggaagcgaaagccaacgaattgcttgaccgagttgtcccc
aacgaaatcaagtatcggcttcacttgaacatgattgcccacggtcgccgtatttgccgc
ccacaaaacccaagatgccaagaatgtgccatcaagcatttgtgcgagtattttcggaag
cgaaaggaagcgggaagtatttga
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