Flavobacterium sangjuense: GS03_01563
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Entry
GS03_01563 CDS
T06656
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fsn
Flavobacterium sangjuense
Pathway
fsn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GS03_01563 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsn03400
]
GS03_01563 (pdg)
Enzymes [BR:
fsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GS03_01563 (pdg)
DNA repair and recombination proteins [BR:
fsn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GS03_01563 (pdg)
Prokaryotic type
GS03_01563 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Opy2
Motif
Other DBs
NCBI-ProteinID:
QBZ98058
UniProt:
A0A4P7PSZ4
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All DBs
Position
complement(1795940..1796584)
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AA seq
214 aa
AA seq
DB search
MELFNETPNWAENLKPLIKKYKGKKHPLDYQNTYQLLVMVILSAQDSDANINKIAPALFE
VYPNLESLAVSNIEALIPHISKVRNFGTKASWLIEIAQTLKTDSNIPTTMDELVALKGIG
RKSANVIMRETNSPAEGIIADLHVIRVAPRIGVIPEANDGNKVEKLLMQALPKDIWGEIG
MAVSFLGRETCRPTNPKCPDCPIQNNCQYPLKTI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggaactatttaatgaaacaccaaactgggcagaaaatctgaaaccattaataaaaaaa
tacaaaggcaagaaacatcctttagattatcaaaatacctatcaacttctggtaatggta
attttgtcggcgcaggattctgatgccaatattaacaaaattgcaccagctttatttgaa
gtttatccaaatctagaaagtctggcggtttccaatatagaagcattaatacctcatatt
tcaaaagttagaaacttcggaacaaaagcaagttggctcatcgaaattgcacaaacactc
aaaaccgatagcaacattccaacaacaatggatgaattggttgctctaaaaggtatcgga
agaaaatcagccaatgtaatcatgcgggaaacaaattctcccgctgaaggaattattgcc
gatttacatgttattcgtgtggcaccgcgaatcggagtcatccccgaagccaatgatgga
aacaaagttgaaaagttattaatgcaggctttaccaaaagacatttggggtgaaatcggt
atggcagtttcttttttaggaagagaaacttgtcgtccaactaacccaaaatgcccagac
tgtccaattcaaaataattgtcaatatcctttaaaaacaatttaa
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