Candidatus Protofrankia datiscae: FsymDg_3116
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Entry
FsymDg_3116 CDS
T01530
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy00300
Lysine biosynthesis
fsy00550
Peptidoglycan biosynthesis
fsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FsymDg_3116
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FsymDg_3116
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fsy01011
]
FsymDg_3116
Enzymes [BR:
fsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FsymDg_3116
Peptidoglycan biosynthesis and degradation proteins [BR:
fsy01011
]
Precursor biosynthesis
Amino acid ligase
FsymDg_3116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEH10425
UniProt:
F8AYC2
LinkDB
All DBs
Position
complement(3702482..3704209)
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AA seq
575 aa
AA seq
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MTSPVLRPVASPARALTELTVGYDGLAVTGGAVAGVVVRGITHDSRAVRPGDLYAALPGA
RAHGAAFVRQAVAAGAVAVLTDRAGADQIAATARSVGTGTGGGVAGGSGATGSGPVAGSG
VAASAGVPGGAGAAGSDGGSVADGAVAAGVGVADVPVLVAADPRALLGPVAARVYGDPSA
ALTLLGVTGTNGKTTVAYLLEAGLRAAGHTTGLIGTVQTRLAGTVLPSVRTTPEATDLQA
LLAVMAERGVTAAAMEVSSHAVALHRVGGIRFAGAAFTNLSQDHLDFHPSMEDYFAAKAA
LFTPERTGVSVIDTDTPWGRQLAAAVPGAITCGTAADAHWRAVDVTAGPTGTTFRALGPH
GVDVRVGIALPGAFNVGNALVALALLVATGVPAPVAAAGLASLPGVPGRMERVDAGQPFL
GLVDYAHTPDAVQTLLRTVRPLVSGRVIVVLGCGGDRDRRKRPLMGAAAAAGADLAIFTS
DNPRSEDPELIIAQMCTGVGTLPPSARGRVMVEPDRAAAIRRAVGFARPGDAVVLAGKGH
ETGQEQAGVVTPFDDRDVLRAELAGWRPVSRQHLA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcaccggtgttgcgtccggtcgcctcgcccgcacgggcgctcaccgagctgacc
gtcggatacgacggtctcgcggtgaccggcggtgctgtggcgggtgttgtcgtccgcggg
atcacccacgactcccgcgcggtgcgtcctggcgacctgtacgcggccctgcccggcgcg
cgcgcacacggggccgccttcgtccggcaggcggtcgcggccggggccgtggccgtgctg
accgaccgggccggcgccgaccagatcgcggcgacggcccggtcggtcggcacgggcacc
ggcggcggcgtggccggcggtagcggcgcgaccggcagcgggcccgtggccggcagcggt
gtggccgccagcgcgggcgtgcctggcggcgcgggcgcggccggtagcgacggcgggagc
gtggctgacggcgctgtggccgccggcgtgggtgtggccgacgtcccggtgctcgtggcc
gcggacccgcgggcgctgctggggccggtcgccgcccgggtgtacggcgacccgtcggcg
gccctgacgctgctgggggtcaccggcaccaacggcaagacgacggtggcctacctgctg
gaggcggggctgcgggccgccgggcacacgaccgggctgatcgggacggtgcagacgcgg
ctggccggcaccgtgctcccctcggtgcgcaccaccccggaggccaccgacctgcaggcg
ctgctcgcggtcatggccgagcgtggggtgaccgcggcggcgatggaggtctccagccat
gccgtcgccctgcaccgggtgggcggcatccgtttcgccggggcggcgttcaccaacctc
agccaggaccatctcgacttccatccgtcgatggaggactatttcgccgccaaggccgcc
ctgttcacccccgagcggaccggggtgtccgtcatcgacaccgacacgccgtgggggcgc
cagctcgccgccgccgtcccgggcgcgatcacctgcgggacggccgccgacgcgcactgg
cgcgccgtcgacgtcaccgccggccccaccgggacgaccttccgcgcgctcggcccgcac
ggcgtggacgttcgggtgggcatcgcgctgcccggggccttcaacgtcggcaacgccctg
gtggcgctggcgctgctggtggccaccggtgtccccgcaccggtggcggcagcggggctg
gcgagtctgccgggtgtgccgggcaggatggaacgggtcgacgccggccagccgtttctc
ggcctggtcgactacgcgcacacaccggacgcggtacagacgctgctacgcaccgtacgg
ccgctggtgtccggccgtgtgatcgtggtgcttggctgcggcggtgaccgtgaccggcgc
aaacgtccgctgatgggcgccgccgcggccgccggcgccgaccttgcgatcttcaccagt
gacaacccccggtcggaggatccggaattgatcatcgcgcagatgtgtaccggcgtgggg
acgttgccgcccagtgcccgcggccgggtcatggtggaaccggaccgggccgcggcgatc
cgccgcgcggtgggcttcgcccggccgggagacgcggtcgtgctcgccggcaaggggcac
gagaccggccaggagcaggccggcgtggtgacacccttcgacgaccgtgacgtgttgcgg
gcggagctggccgggtggcgtcccgtgtcgcgccagcacctggcgtga
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