KEGG   Candidatus Protofrankia datiscae: FsymDg_4314
Entry
FsymDg_4314       CDS       T01530                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
fsy  Candidatus Protofrankia datiscae
Pathway
fsy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FsymDg_4314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fsy03400]
    FsymDg_4314
Enzymes [BR:fsy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FsymDg_4314
DNA repair and recombination proteins [BR:fsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FsymDg_4314
 Prokaryotic type
     FsymDg_4314
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: AEH11571
UniProt: F8AYK3
LinkDB
Position
complement(5038108..5038839)
AA seq 243 aa
MNVSTLADAATESPLARTRRARKIVRILGELHPDARIALNFGNPLELLAATVLSAQCTDK
KVNEVTPTLFAKYRTADDYAAADRAELEAILRPTGFFRAKANSLIGIGAALADRFDGNVP
PRLDDLVTLPGVGRKTANVVLGHIFDQPGITVDTHVGRLSRRLGLTTNTDPVRVESDLAK
LLERRDYTIASDRLIFHGRRVCHARRPACGVCGIARLCPSFGLGVTTPAQAARLVRADAE
AAR
NT seq 732 nt   +upstreamnt  +downstreamnt
gtgaacgtgtccaccctcgccgacgccgccaccgaaagcccgctggcgcggacacggcga
gcccggaagatcgtccgcatactcggcgagctccacccggacgcacggatcgcgctcaac
ttcggcaatcccctcgagctcctcgccgccaccgtcctgtccgcccagtgcaccgacaag
aaggtcaacgaggtaaccccgacgctgttcgcgaagtaccgcaccgccgacgactacgcc
gccgccgaccgggcggaactcgaggccatcctgcggccgaccggtttcttccgggccaag
gcgaactcgctcatcgggatcggcgccgccctggccgaccgtttcgacgggaacgtgccc
ccgcgtctcgacgacctggtcaccctgcccggggtcggccgcaagaccgccaacgtcgtg
ctcgggcacatcttcgaccagcctggcatcacggtcgacacacacgtcggacggctctcg
cgccggctcgggctcaccaccaacaccgacccggtcagggtcgagagcgacctcgccaag
ctgctcgaacggcgcgactacacgatcgcctccgaccggctcatcttccacggccggcgg
gtctgccacgcccggcggccggcgtgcggcgtgtgcggcatcgcccgcctgtgtccgtcg
ttcggcctcggcgtgaccacgccggcacaggccgcccggctggtccgcgccgacgccgaa
gcggccaggtga

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