Fragaria vesca (woodland strawberry): 101296367
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Entry
101296367 CDS
T02666
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101296367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101296367
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101296367
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101296367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-C2H2_ZN292
UNC83_N
Motif
Other DBs
NCBI-GeneID:
101296367
NCBI-ProteinID:
XP_004296799
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All DBs
Position
LG4:complement(10478099..10481078)
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AA seq
267 aa
AA seq
DB search
MEASGNERRSFGKMGYGCKHYRRRCRIRAPCCNEIYPCRHCHNEATSMLSNPFDRHELVR
HDVKQVICSVCDTEQPVARDCTNCGVSMGEYFCDICKFYDDDTEKGQFHCDDCGICRIGG
RENFYHCKKCGSCYSISLLDNHLCVENSMRHHCPICYEFLFDSLKDTTVMKCGHTMHCEC
YNEMIKRDKYCCPICSKSVIDMSRTWKRIDEEIEATVMPEDYRNKKVWILCNDCNDTTEV
FFHIIGQKCNHCKSYNTRTIAPPVLPQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctcaggcaatgaacgtcgaagttttgggaagatgggttacggatgcaagcat
tacagaaggagatgccggattcgagctccgtgctgcaacgagatctacccatgtcgccat
tgccacaacgaggccacgagcatgttgagcaacccctttgatcggcatgagctcgttcga
cacgatgttaaacaagttatttgttctgtctgtgacacagagcagccggtggctcgagat
tgcactaactgcggcgtcagtatgggggaatatttctgtgatatttgcaagttctatgat
gatgatactgagaaagggcaatttcactgtgatgattgtgggatctgcagaatcggtggc
cgtgaaaatttttatcactgcaaaaagtgtgggtcttgctattcgatcagcttgcttgat
aaccacctgtgtgtagagaactccatgcggcaccactgccccatttgctacgagttcctt
tttgactctctgaaagacaccactgtaatgaaatgtgggcacacgatgcattgtgaatgt
tacaacgaaatgataaagcgggacaaatattgttgtccaatatgctccaagtccgtgatt
gacatgtctagaacttggaagagaatcgatgaagagatcgaagcaaccgttatgcccgag
gattatcggaataaaaaggtttggatcctctgcaatgactgcaatgacacaaccgaagtt
ttcttccacattattggccagaaatgcaaccactgcaaatcatacaacactcgcacaatt
gcccctccagttcttcctcaatga
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