KEGG   Fragaria vesca (woodland strawberry): 101307444
Entry
101307444         CDS       T02666                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03420  Nucleotide excision repair
fve04120  Ubiquitin mediated proteolysis
fve04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101307444
   04120 Ubiquitin mediated proteolysis
    101307444
  09124 Replication and repair
   03420 Nucleotide excision repair
    101307444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101307444
   03400 DNA repair and recombination proteins [BR:fve03400]
    101307444
Enzymes [BR:fve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     101307444
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101307444
  Multi subunit type E3
   SCF complex
    Ring finger protein
     101307444
   Cul2 complex
     101307444
   Cul3 complex
     101307444
   Cul4 complex
     101307444
   Cul7 complex
     101307444
   Cul8 complex
     101307444
   Cul9 complex
     101307444
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101307444
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101307444
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_16
Other DBs
NCBI-GeneID: 101307444
NCBI-ProteinID: XP_004308610
LinkDB
Position
LG7:complement(10967380..10967715)
AA seq 119 aa
MTTDSDVTMVDVIGGVAGAGVGPSKKKTDKRFEMKKWSAVSMWAWDIVVENCAICRNHIM
ELCIECQANQQSVTSDECTVAWGSCNHAFHFHCISRWLKNRQVCPLDNSEWEFQKYGNS
NT seq 360 nt   +upstreamnt  +downstreamnt
atgacaactgactctgacgtgacgatggtggacgtgatcggtggtgttgcaggtgcaggt
gttggtccttcgaagaagaagaccgacaagcgatttgaaatgaagaagtggagcgcagtg
agtatgtgggcgtgggatattgtggtggagaactgcgccatctgcaggaaccatataatg
gagctgtgcatagagtgccaagccaaccagcagagtgtgacgagcgacgagtgcacggtg
gcttggggaagttgcaaccatgccttccacttccactgcattagccgatggctcaagaat
cgtcaggtctgtcccttggacaacagcgagtgggagtttcagaagtatggtaatagctaa

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