Fragaria vesca (woodland strawberry): 101307444
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Entry
101307444 CDS
T02666
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03420
Nucleotide excision repair
fve04120
Ubiquitin mediated proteolysis
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101307444
04120 Ubiquitin mediated proteolysis
101307444
09124 Replication and repair
03420 Nucleotide excision repair
101307444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101307444
03400 DNA repair and recombination proteins [BR:
fve03400
]
101307444
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
101307444
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101307444
Multi subunit type E3
SCF complex
Ring finger protein
101307444
Cul2 complex
101307444
Cul3 complex
101307444
Cul4 complex
101307444
Cul7 complex
101307444
Cul8 complex
101307444
Cul9 complex
101307444
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101307444
TCR (transcription coupled repair) factors
Cul4-CSA complex
101307444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
101307444
NCBI-ProteinID:
XP_004308610
LinkDB
All DBs
Position
LG7:complement(10967380..10967715)
Genome browser
AA seq
119 aa
AA seq
DB search
MTTDSDVTMVDVIGGVAGAGVGPSKKKTDKRFEMKKWSAVSMWAWDIVVENCAICRNHIM
ELCIECQANQQSVTSDECTVAWGSCNHAFHFHCISRWLKNRQVCPLDNSEWEFQKYGNS
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgactctgacgtgacgatggtggacgtgatcggtggtgttgcaggtgcaggt
gttggtccttcgaagaagaagaccgacaagcgatttgaaatgaagaagtggagcgcagtg
agtatgtgggcgtgggatattgtggtggagaactgcgccatctgcaggaaccatataatg
gagctgtgcatagagtgccaagccaaccagcagagtgtgacgagcgacgagtgcacggtg
gcttggggaagttgcaaccatgccttccacttccactgcattagccgatggctcaagaat
cgtcaggtctgtcccttggacaacagcgagtgggagtttcagaagtatggtaatagctaa
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