Fragaria vesca (woodland strawberry): 101313018
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Entry
101313018 CDS
T02666
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101313018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101313018
03041 Spliceosome [BR:
fve03041
]
101313018
03032 DNA replication proteins [BR:
fve03032
]
101313018
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
101313018
Spliceosome [BR:
fve03041
]
Complex A
U1 snRNP components
Sm proteins
101313018
U2 snRNP components
101313018
Complex B
U1 snRNP components
101313018
U4/U6.U5 tri-snRNP components
101313018
Complex C
U2 snRNP components
101313018
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
101313018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101313018
NCBI-ProteinID:
XP_004298981
LinkDB
All DBs
Position
LG5:3408195..3410578
Genome browser
AA seq
263 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKGKKNN
EEREDRRTLGMVLLRGEEVVSMTVEGPPPQEESRAKASSAAAMAGPGIGRGAGRGVVAPL
AQAQPGLSGPVRGVGGPAPGMMQPQISRPPMNYPAAPVLRPPGQMAGYPGQGPPQMTRGP
PPSMPPPQFARPGGPPQFPPGPPPMQFAQRPMGPPGQMMRGPPPPGMQGPPPRPGMPPPP
GGVPVYGPPRGMPPPPNNQNQQQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtccaagagctccaagatgcttcaattcatcaactaccgcatgcgcgtcacg
atccaagacggccgccagctcgtcgggaagttcatggccttcgaccgccacatgaacctc
gtcctcggcgactgcgaggagttccgtaagctcccgccgtcaaaaggcaagaagaacaac
gaggaacgcgaggaccgccgcacactcgggatggtcctcctccgcggcgaagaggtcgtc
tccatgacagtcgagggtccgccgcctcaggaagagtccagagccaaagcctccagcgcc
gccgccatggccggacctggaatcggccgcggcgccgggagaggagtcgtcgcgccactc
gctcaggctcagccgggtctctccggtccggttcgcggcgtcggtgggcctgctcctggc
atgatgcagcctcagatttctcgcccgccgatgaactatccggctgcgccggtgctcagg
ccaccgggccagatggctggttatccagggcaggggcctccacagatgactcgtggacca
ccgccttctatgcctcctccacagtttgctaggcccggcggaccgccgcagtttccacca
ggtcctccaccaatgcagtttgctcagagaccaatggggcctcctggccagatgatgagg
ggtccaccgcctcctggaatgcaaggtccaccgcctcgtcctgggatgcctcctccacct
ggtggtgttcctgtgtatggacctcctcgtggcatgccgcctccacccaacaaccagaac
cagcaacagtga
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