Fragaria vesca (woodland strawberry): 101314095
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Entry
101314095 CDS
T02666
Name
(RefSeq) uncharacterized LOC101314095
KO
K16189
phytochrome-interacting factor
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101314095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101314095
Transcription factors [BR:
fve03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101314095
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
SHOCT
Motif
Other DBs
NCBI-GeneID:
101314095
NCBI-ProteinID:
XP_004300961
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Position
LG5:4025726..4029399
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AA seq
412 aa
AA seq
DB search
MQNINNNQLQGAETYSIINQGFDFQSIPYEDFALVSDAAVNSQTTVSQSQEHFVCWNSSV
INPHTDVTVHHVNPQNQGSFMSWNSSTLNSQTDVAVNHDNPQSQKHFILWNSSTQDEIVN
GLPNIDQPQSIFASQPLFSDEKVFPSDSNKERSRISKYASELGSRDDDAVVISEEEFTRK
KNKRLKKSELKKSELHNQSERNRRNAIKDKIHILGGLVPNCTKRIYHFQTDQASILSDVV
DHMKALLVQRQMLSMTGHPMWLAGVPNSITQQIPQYMPYMGMGMGSNMYGYSVRGTSHPF
LSIPSAPTPSLPILSESCIVSCPQFQVPPPPLSPTTFIAAQVKPTATTTFNTIDTVVQPQ
PIPYTINLANQGECSTSQYNAIGTRDHNQKVPTLSEIYKVMASGRIPPHSGP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatcaacaacaatcaactacaaggagcagagacgtactctatcattaatcaa
gggtttgattttcaatctatcccgtatgaagattttgccctagtttctgatgctgctgtc
aattctcagactactgtatctcaaagtcaggaacattttgtctgttggaactcctctgtt
atcaaccctcatactgatgtaactgttcatcatgtcaatcctcaaaatcaagggtctttt
atgagttggaactcctcaacactcaactctcagactgatgtagctgtcaatcatgacaac
cctcaaagtcaaaaacactttatcttgtggaactcctcaacacaagatgaaatagtcaac
ggtttgccaaatattgatcaacctcaatcaatatttgcatctcaacctcttttctcagat
gaaaaagtttttccatcagactccaacaaggaaagatcaagaatatccaaatatgcatca
gagcttggtagtagagatgatgatgcagtagtgatttctgaagaagaatttactcgtaaa
aaaaataaacgacttaaaaagagtgaacttaaaaagagtgaactgcataaccaatctgag
agaaaccgtagaaatgcgattaaagataagatacatatattgggtggactcgtacctaac
tgcactaagcgcatttatcattttcagacagatcaagcttcgatattgagtgacgtggtt
gatcatatgaaagctcttctagttcaacgtcaaatgctgagcatgacaggacaccctatg
tggctggctggggttccaaacagtattacacaacaaataccccaatacatgccatatatg
ggaatgggaatgggttctaatatgtatggttattcggtacgtggaacaagccatccgttt
ttatctattccctcagctcccactccaagtttgcctatactttctgaatcatgtatcgtt
tcatgccctcaattccaagtgccccctccgcctctatctccgacgacattcattgctgca
caagtaaagccgaccgccactaccacgttcaatactattgatactgttgttcagccacag
ccgattccttacacaatcaaccttgcaaaccaaggagaatgtagtacttcccaatacaat
gcaatagggacgagggatcacaaccaaaaagtaccaactctaagcgagatatataaagtg
atggctagtggcaggataccacctcattcaggaccatag
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