Fragaria vesca (woodland strawberry): 101314290
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Entry
101314290 CDS
T02666
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04075
Plant hormone signal transduction
fve04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101314290
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101314290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101314290
Transcription factors [BR:
fve03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101314290
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
101314290
NCBI-ProteinID:
XP_004302325
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Position
LG6:complement(3989422..3993342)
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AA seq
710 aa
AA seq
DB search
MPLSELLSRGRSDSNQDFEPLSDLVELVWENGQIMMQSQSNRARKSPTFNSLPSHTPRNR
DRDLGNGSNGKMGKFGSVNSVIDEIPLSVPSGEMGLSDDDDMLPWLNYALDQPLQHEYSH
DFMPEISDVTANEISTNGNLTPIDKRSSSSQMYRESNTNSTPGLEQRNVSKLSSVSAAEA
SRPRTSTTHLYQMSSQQPQASIPSLRSIASDMVGGNTSSAAHHAVCKNSIQASPAGGFPG
IPMQKQNPPTSSNNNSTIVNFSHFSRSSLLRVEKIKNKDKVSAATSSNPPESILIESSCG
LMKESTSQCQDVMAPSSVDMKPTASKPLEEPHTTKQSEAAAYQEDPSKNDDRNSNHIPCE
SAIRPLPDVEKTTEPVVDSSVCSVNSVEKASDDPTRVLKRKSRDTDDSECHSEDVEEESV
GVKKKVAHGRGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA
IEYLKTLQLQVQIMSMGAGLYMPQMMLPPGMQHMHAPHMAHFSHMGMGMGMGMGLGMGFG
MGLPDMNGGSSGYPMLQVPPMQGAHFPGSPMSGHTAFNGMIGSNLQMFGLPGQGVSMPMQ
RPPLVPISGGSFMKSAIGPNACGAGGPVENMEPAPGTSSKDSVQNMNSQIMQNINTSSSM
NQTSNQATNEGFGQSALVQKNVQALDVSTSRANRSTNGKDHVLSRPASYE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcagagctattatccagagggagaagtgattcgaatcaagatttcgaacct
ttgagtgatttggttgaactggtatgggaaaatgggcagattatgatgcaaagtcagtcc
aatagagctagaaagagtccaacttttaacagcttaccatctcacactcccaggaatcga
gatagagatttaggaaatggaagcaatgggaagatggggaaattcgggtcagtgaactct
gtgattgatgaaattccattgtcggtgccatctggtgaaatgggtttgagtgatgatgat
gacatgttgccttggttgaactatgcccttgatcaacctttacaacatgaatatagccat
gattttatgcctgaaatatctgatgtcactgcaaatgagatttccaccaatggaaatctc
acgccaatcgacaaaaggagtagctctagtcagatgtatagggagtccaacaccaattct
actcctggtttggaacaaaggaatgtgtcgaagctttcttcagtaagtgctgctgaggct
agcagacctagaactagtactactcacttataccagatgtcatcacagcaaccccaagca
tcaattccatctcttagatcaatagcttcggatatggttggtggtaacacaagtagtgcc
gcccatcatgctgtttgcaagaattcaattcaggcttcacctgcaggtggttttcctggc
ataccaatgcagaagcaaaatccaccaacttctagtaacaataattcaaccatagtgaac
ttttctcatttctcacgatcgagtttactaagggtggaaaagattaaaaataaggataag
gtttcagctgcaaccagtagcaatcctcctgagtcgatactaatcgagtcaagctgtggt
ttaatgaaggagtcaacttcacagtgccaagatgttatggcaccctccagtgttgatatg
aaaccaactgcatctaagccgcttgaggaaccacatactactaaacagtcagaggctgct
gcatatcaagaggatccctctaagaatgatgacagaaactccaatcatattccttgtgaa
agtgcaattaggccacttccagatgttgaaaaaactacggagcctgtggttgattcttct
gtttgctcagtcaatagtgtggagaaagcttcagatgatccaactcgtgtgttgaagaga
aaatctcgtgatactgatgactctgaatgccatagtgaagatgtagaggaagagtctgtt
ggcgtgaaaaaaaaggtagctcatggtcgaggtacgggttccaagagaagcagagcagca
gaagtgcataacttatcagaaaggaggcgaagggatagaatcaatgaaaagatgcgtgcg
cttcaagaactcatacctaattgcaataaggtggacaaagcttcaatgctcgatgaggct
attgagtatctgaagacgcttcaactccaagtacagattatgtcaatgggagctggtttg
tatatgccacaaatgatgttaccaccaggaatgcaacatatgcatgcaccccatatggct
catttctcgcacatgggtatgggaatgggaatgggaatgggtttgggcatgggttttggg
atgggtttgcctgacatgaatggtggatcttctggttaccctatgcttcaggtgccccct
atgcaaggtgcccattttcctggttcaccaatgtcggggcatactgcgttcaatgggatg
ataggatctaatctacagatgtttgggcttcctggtcaaggagtttctatgccaatgcaa
cgcccacccttagttcccatatcaggagggtcctttatgaagtcagctataggacctaat
gcttgtggtgcaggaggtcctgtagaaaatatggaacctgctccaggtactagttcaaag
gattcagtgcagaacatgaattctcaaattatgcaaaatatcaacaccagtagttccatg
aatcagacttctaatcaggcaacaaatgagggatttggacagtctgcattggtgcaaaaa
aatgttcaagcgttggatgttagtaccagcagagctaacagatctactaacggaaaagac
catgtgcttagtagaccagctagttatgagtaa
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