Frieseomelitta varia: 122530238
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Entry
122530238 CDS
T09482
Name
(RefSeq) atrophin-1-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122530238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122530238
Enzymes [BR:
fvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
122530238
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122530238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
122530238
NCBI-ProteinID:
XP_043512968
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MQVATLFRESATLLGASSLDPPQTHHHQSMHPQQQQQQQQQQLQHPADLHLAHHMQHHYK
LSYPSPVQNGGPNGTPMNCAGSQGVMVKQEARDDGYETSPDLEMRSTGGDSSQQYHTPLT
PHTPHTPHTPHTPLTPISATAHQPQQPGSSASTLGQVAIKCETPVDPYSFVDEEMSMGGI
RTASSPVGNPENMTCPAGGQPILATPTSTPPGSLSGPQHLQMNLGAMNGNVNPQLTAQQP
KKRGRKRKSEMILTPEEAELAEAKKRAKTYKERKKHDRFDGMPEEEVSKRVLPDHLTNNL
DIIIIGINPGLFAAYKGHHYAGPGNHFWKCLHLSGLTPEPLTADDDYKLLRFGIGFTNMV
ARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGKLIYEVFSGKKEFGFGRQPNLV
EGTNTYMWVMPSSSARCAQLPRAADKVPYYAALKKFRDYLNGTISHLDESDIVFADSKLK
KKEQEAIEDKKPAFCEELTNEGESRITEANGTGMKQDSNSQIPGKKKRGRPKKIKNPEDQ
PPPDPEKLDANGEVIKKRRGRPKKIHQQQKQQEREMREQQQQHQQQHQGMGHLGDGYGTV
VPNCFSPPKTFAHMAPYPQPMNDSGFYGQGINDSPYSINAKQSPVHLQHYSQSPKSMSLS
FTHSDLSSEINTAISSENNLEPSPLTSPSVEHPDFEPPTSISQQNMNNDHRQYNPAGNGE
NPGHHGSPGTPSHQSYTSYMGYHDQTSDPHNPHPHQTTPTPLSQTTDDHSHHSHPTPPHT
HPHTPTHASMSPHHHPHEQYAMKRNAGQDVASKSLSDLESLVDQIPSIADGGSQRLQHAH
PGMTDDGSLAEKMEAHHQSYLSGFSGMPNAGMSNYSPPLAPTGAIYPSSLHHSPNDGYGS
LYGMNGRQHQDSQQQQQQQQQQQQQQQQQQQHQQQQQQQQHSKSYTVENLASSNYTPSMS
HGHPGNSYPNIIPGPHYPVPMGSTNGYLFGGLESSLMQRTYGMSGMSGMGGMHPSLGHMA
NPYSYNGSYSSSFDAYPAPPAGIHAPSANYPGGYASVGSATPGTSTPPSYLPSHHRPSVD
LAYDGV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggcaacgctatttagagagagcgccaccctgctgggtgcctctagcctggac
ccaccgcagacccaccatcaccagtctatgcacccgcagcagcaacagcagcaacagcag
caacaactacaacatcctgccgacctgcatctggctcatcacatgcagcatcactacaaa
ttatcgtatccgtcgcctgtacaaaatggtgggccgaatgggacgccgatgaactgcgct
ggttctcaaggagtgatggtaaagcaggaagcgagggatgacggttacgagacaagtccg
gacctcgagatgaggagcaccggtggtgacagcagtcagcagtaccacacgccgctgaca
ccgcacacaccgcacacaccacacacgccgcacacacccctcacgccgatatcggcgaca
gcgcatcaaccccagcaacctggctcgtccgcttccaccctcggacaggtggcgatcaag
tgcgagaccccggtggacccgtactcgttcgtcgacgaggaaatgtcgatgggcggcata
aggacggcgagcagcccggttggcaatccggagaacatgacgtgtccggctgggggtcaa
cccatcctggctacaccaacgtcaacgccgcctggctcgttgtccgggccgcaacatctc
cagatgaacctcggcgcgatgaacggcaacgtgaatccccaattgacggcgcaacagccg
aagaaacggggccgcaagagaaaatcagagatgatcctcacccccgaagaggcggaatta
gccgaggcgaagaaacgagcaaagacgtacaaagagaggaagaagcacgaccgattcgac
ggtatgccggaagaggaagtgagcaagcgcgttcttcctgatcatcttaccaacaatctg
gacattatcataattggaatcaacccgggactcttcgccgcttacaagggccaccactac
gccgggccggggaaccatttctggaagtgtttgcacttgagtggactgacacccgaacca
ctgacggcggatgacgactacaagctcctgcgcttcggtatcggtttcacgaatatggta
gctcgcgccactaaaggcagcgctgatctaacgaggaaagaaatcaaagaaggtagccac
attctgttggagaaattacggaaatataaaccgaagatcgctgtgtttaacggtaaactc
atatacgaggtattctctgggaagaaggagtttggattcggtagacaacctaacttggta
gagggcacaaatacgtacatgtgggtgatgccatcgagtagcgcgagatgcgcgcaacta
ccgcgggcggcggacaaagtgccatactacgcggcgctgaagaagtttcgcgattacttg
aacggcacgatctctcacctggatgaatccgacatagtgttcgcggactcgaagctgaag
aagaaggaacaagaggcgatcgaggataaaaagccagcgttctgcgaggagcttacgaac
gagggagaaagcagaatcaccgaggcgaatggaaccggcatgaaacaagactccaactct
caaatacccggcaagaagaaaagaggcaggccaaagaagataaagaacccggaagatcaa
ccgccgcccgatcccgagaagttagacgcgaacggggaagtgataaagaaacggcgagga
cggccgaaaaagatacatcagcagcaaaagcaacaggaacgggagatgagggaacagcag
cagcaacatcagcaacagcatcagggtatgggtcatctcggggacggttacggtaccgtg
gtacccaactgcttctcaccaccgaagacatttgcgcatatggctccctatccacaaccg
atgaacgattctggattttacgggcaaggtatcaacgacagcccgtatagtataaatgca
aaacaaagcccggtacacttgcaacactacagccaaagcccgaaatccatgtcgctctcg
tttactcattccgatctatcctcggagatcaacaccgcgatttcttcagagaacaacctg
gaaccatcgccgttgacatccccgagcgtcgagcatccggatttcgaaccacctaccagt
atctcgcagcaaaatatgaacaacgatcatcgccagtacaatccagctgggaacggcgag
aatccgggtcatcacggtagcccgggtacgccgtcccatcagagctacaccagctacatg
ggttatcacgaccaaacctccgacccccacaatccccatccccaccagactacgccgaca
ccgttgagccaaactaccgacgaccattcgcatcactctcatccgactcccccgcatacg
catccgcatacgccgacacacgcctcgatgtcacctcaccaccatccgcacgagcagtac
gccatgaagagaaacgccggacaggacgtggcctcgaaaagtctcagcgacttggaatct
ctagtcgatcagataccgagcatagccgacggcggtagccaacgtctgcaacacgcgcat
cccgggatgaccgacgacggatctcttgcggaaaaaatggaagcgcatcatcagtcttat
ttgtcgggattctctggtatgcctaacgccggcatgtccaattacagccctcccttggcg
cccaccggtgcgatctatccatcttcgttacaccattctcccaacgacggttacggctct
ctttacggcatgaacggacgccagcatcaggactcccagcagcagcagcaacagcagcag
cagcagcagcaacagcaacagcagcaacagcagcatcaacagcaacagcaacagcaacag
catagtaaatcgtacacagttgaaaatctagcgtctagcaattacacgccaagcatgagc
cacggacaccctggtaactcgtatccgaatattattcctggacctcattatcccgtacca
atgggatcgacgaacgggtatctttttggtggccttgaatcaagcttgatgcaacgcacc
tacgggatgagcggtatgagcggcatggggggaatgcatccatccctcggtcacatggcg
aatccttattcctacaatggttcgtactctagttccttcgacgcctatccggccccgcca
gcagggattcacgcgcccagcgctaattatcccggcggttacgcgagcgttggtagcgcg
acgccaggtacttctacgccaccgtcttaccttccatcccatcacagaccgtcagtcgac
ctcgcttacgacggtgtatga
DBGET
integrated database retrieval system
