Fusarium venenatum: FVRRES_11958
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Entry
FVRRES_11958 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_11958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_11958
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FVRRES_11958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_15
AAA_22
DUF3584
AAA_28
AAA_16
PduV-EutP
SRP54
AAA_25
AAA
Arf
ORC-CDC6-like
RsgA_GTPase
AAA_14
nSTAND3
AAA_13
NACHT
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
37263591
NCBI-ProteinID:
XP_025581659
UniProt:
A0A2L2TG13
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Position
IIII:2656133..2656996
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AA seq
287 aa
AA seq
DB search
MTTPPKPPRVEVNKLSYTFPDYSTGVNNITLDLPPRSRTLLIGANGAGKTTLLRLLAGKR
LAPSDTISICGVDPFKDGLEGVTYLGLEWVLNPIVRTDIGVNELLRSVGGDAYPDRRDEL
VAMLDVDTNWRMHAVSDGERRRVQLAMGLLRPWTVLLLDEITVDLDVLSRAEFLAWLKHE
TEIRECTIVYATHILDNLAGWPTHLAHMHLGTVKEWDEADKMLATIDGTVGASGNSRLGE
LVLGWLRDDLKERGPRSNANRGSEGKTYGFGGIQIGGYGDESKPREA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgactactcctcccaagccccctcgtgtcgaggtgaacaagctctcatacacgttccct
gactactcaactggcgttaacaacatcactcttgacctgcctccgcgatcccgtactctt
ctcattggtgccaacggtgctggtaagacgactctgctccgtctccttgccggcaagcgc
cttgcacccagtgacaccatctctatctgtggagtcgatcctttcaaggatggtctagag
ggtgtcacttatctcggcctcgaatgggttctcaaccctattgtccgaactgacattggc
gtcaacgagctgcttcgctccgtcggcggtgatgcgtaccctgatcgtcgggatgagctc
gtagccatgctcgacgtcgacaccaactggcgcatgcacgctgtttctgatggcgagcgt
cgtcgtgttcagcttgccatgggtcttctgaggccctggactgttcttcttctcgatgag
atcactgttgatctcgatgtcctgagccgtgccgagttcctcgcttggcttaagcacgag
acagagatccgggagtgcacaatcgtttacgctacccatattttggataaccttgctggc
tggcctactcacctcgcgcatatgcacctcggtactgtcaaggagtgggacgaggccgac
aaaatgcttgccaccatcgatggcactgtcggtgcctcgggcaacagtcgtcttggagag
ctcgtcctgggctggctccgagatgacttgaaagagcgaggaccacgaagcaatgccaac
cgtggctctgaaggcaagacgtacggtttcggaggaatccaaattggcggatatggcgac
gagtctaagccgcgtgaggcataa
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