KEGG   Fusarium verticillioides: FVEG_08960
Entry
FVEG_08960        CDS       T04869                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
fvr  Fusarium verticillioides
Pathway
fvr03018  RNA degradation
fvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FVEG_08960
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVEG_08960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_08960
   03041 Spliceosome [BR:fvr03041]
    FVEG_08960
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVEG_08960
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FVEG_08960
Spliceosome [BR:fvr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FVEG_08960
 Complex C
  U2 snRNP components
    FVEG_08960
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 30066652
NCBI-ProteinID: XP_018755611
UniProt: W7MPA1
LinkDB
Position
5:complement(2826951..2827968)
AA seq 96 aa
MADTGEEPHHVSEPLDLVRLLLNEVVFVKLRGDRELKGKLHAYDSHCNLVLGEVEETIYT
VDEDDDDEELKTISRKSEMLFVRGDSVVLISPGVPF
NT seq 291 nt   +upstreamnt  +downstreamnt
atggctgacacaggcgaagagccacatcacgtttcggagcctctcgaccttgttcgactc
cttctcaacgaggttgtctttgtcaagcttcgaggagaccgtgagctcaaggggaagcta
cacgcttacgacagtcactgtaatctggtattgggagaagtcgaggagaccatctacact
gtggatgaggacgatgacgatgaagaactcaagactatcagccggaaatccgagatgctg
tttgtgagaggcgatagtgtcgtccttatctcacctggggttccgttctag

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